RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FOXP3Q9BZS1 431 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 SRGAP2O75044 1071 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 CDH16O75309 829 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 PAPD7Q5XG87 772 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 SPATA5Q8NB90 893 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TUBGCP3Q96CW5 907 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 CNOT6LQ96LI5 555 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 MAGEB18Q96M61 343 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 LSM14BQ9BX40 385 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 CFAP99D6REC4 459 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RAD21O60216 631 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ALOX15P16050 662 aaPredicted RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 NOA1Q8NC60 698 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 UBN1Q9NPG3 1134 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ABCA10Q8WWZ4 1543 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 KDM5BQ9UGL1 1544 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 F8VZ95 297 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 C21orf59P57076 290 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 NSL1Q96IY1 281 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 PGBD1Q96JS3 809 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ING2Q9H160 280 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 MID2Q9UJV3 735 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 EVPLLA8MZ36 301 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 HNRNPRO43390 633 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 SERPINB2P05120 415 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 BRAFP15056 766 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 CDH3P22223 829 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ARHGAP44Q17R89 818 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 LACTB2Q53H82 288 aaPredicted RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 UNC13DQ70J99 1090 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RIN2Q8WYP3 895 aaPredicted RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 MGRN1O60291 552 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 STAT4Q14765 748 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 KYNUQ16719 465 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 NXNQ6DKJ4 435 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 SYDE1Q6ZW31 735 aaPredicted RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 MTBPQ96DY7 904 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ANAPC5Q9UJX4 755 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RFX7Q2KHR2 1363 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TRPM1Q7Z4N2 1603 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 FAM47DPA6NHR8 397 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 SRRM1Q8IYB3 904 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 KIF2BQ8N4N8 673 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 MRPS26Q9BYN8 205 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 EDEM3Q9BZQ6 932 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 SAMSN1Q9NSI8 373 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 CTDP1Q9Y5B0 961 aaPredicted RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 CLIC4Q9Y696 253 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 CNOT3O75175 753 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 MCL1Q07820 350 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 KIF22Q14807 665 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 KLHL38Q2WGJ6 581 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 HAUS3Q68CZ6 603 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 TC2NQ8N9U0 490 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 NSUN7Q8NE18 718 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 DGCR14Q96DF8 476 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 C1orf50Q9BV19 199 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 PARVGQ9HBI0 331 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 CAPN11Q9UMQ6 739 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 DMTF1Q9Y222 760 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 VWA5AO00534 786 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 UQCRFS1P1P0C7P4 283 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 VDRP11473 427 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 JAK1P23458 1154 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 CXCR5P32302 372 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 ZNF76P36508 570 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 SLCO1A2P46721 670 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 RPL5P46777 297 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 HAND2P61296 217 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 BNC1Q01954 994 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 TRIM50Q86XT4 487 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 MB21D1Q8N884 522 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 DACH2Q96NX9 599 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 C6orf50Q9HD87 102 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 STOML2Q9UJZ1 356 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 RBM47A0AV96 593 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 RABGAP1LQ5R372 815 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 SNX30Q5VWJ9 437 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 FAAH2Q6GMR7 532 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 FAM47EQ6ZV65 393 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 SLC26A7Q8TE54 656 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 QKIQ96PU8 341 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLK3-212ENST00000563418 CDK19Q9BWU1 502 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 WDR35Q9P2L0 1181 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 LRP2BPQ9P2M1 347 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 PPARGC1AQ9UBK2 798 aaKnown RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 DNAJC12Q9UKB3 198 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 IL15P40933 162 aaPredicted RBP6.69□□□□□ -1.34
CLK3-212ENST00000563418 DLG4P78352 724 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 NONOQ15233 471 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLK3-212ENST00000563418 PI16Q6UXB8 463 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 OLFM1Q99784 485 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 TEKT2Q9UIF3 430 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 E9PCH4 1651 aa6.69□□□□□ -1.34
CLK3-212ENST00000563418 ART3Q13508 389 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms