RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 ARNTL2Q8WYA1 636 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 TNFRSF25Q93038 417 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 MTCH2Q9Y6C9 303 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 EPOPA6NHQ4 379 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 ENPP3O14638 875 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 SLC37A4O43826 429 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 LPXNO60711 386 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 CD52P31358 61 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 PRKCEQ02156 737 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 UIMC1Q96RL1 719 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 KIF2CQ99661 725 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 LLPHQ9BRT6 129 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 NIFKQ9BYG3 293 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 GJB4Q9NTQ9 266 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 PADI3Q9ULW8 664 aa13.77□□□□□ -0.21
NSMCE1-204ENST00000563273 CHMP2AO43633 222 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 DKC1O60832 514 aaKnown RBP eCLIP13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 MMP1P03956 469 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 TMOD1P28289 359 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 PAK2Q13177 524 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 GRB10Q13322 594 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 PIK3AP1Q6ZUJ8 805 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 CRIPAKQ8N1N5 446 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 ATXN2LQ8WWM7 1075 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
NSMCE1-204ENST00000563273 GPR182O15218 404 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 GPR32O75388 356 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 STBD1O95210 358 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 PSMC5P62195 406 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 TMEM62Q0P6H9 643 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 NR5A1Q13285 461 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 TRIM29Q14134 588 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 UGCGQ16739 394 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 NPAS4Q8IUM7 802 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 SLFN12Q8IYM2 578 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 LINC01599Q8WXQ3 324 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 CERS4Q9HA82 394 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 RWDD3Q9Y3V2 267 aa13.75□□□□□ -0.21
NSMCE1-204ENST00000563273 GBF1Q92538 1859 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 RFXAPO00287 272 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 DLL1O00548 723 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 JAK2O60674 1132 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 RPS6KA5O75582 802 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 UPP2O95045 317 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 STAG3L1P0CL83 205 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 EFCAB12Q6NXP0 572 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 SPRED2Q7Z698 418 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 RTN4RL1Q86UN2 441 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 DIS3L2Q8IYB7 885 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 EXOC8Q8IYI6 725 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 METTL13Q8N6R0 699 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 HAS1Q92839 578 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 GJA10Q969M2 543 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 JPH2Q9BR39 696 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 TMX1Q9H3N1 280 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
NSMCE1-204ENST00000563273 BTBD18B2RXH4 712 aa13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 C5orf67F2Z3F1 127 aa13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 DGKIO75912 1065 aa13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 RB1P06400 928 aa13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 P4HBP07237 508 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-204ENST00000563273 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms