RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDH1-205ENST00000562836 CD93Q9NPY3 652 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PDP2Q9P2J9 529 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 NVLO15381 856 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 TLR2O60603 784 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 CRYZL1O95825 349 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 KRT4P19013 534 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SOX11P35716 441 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 GNALP38405 381 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 ARFIP2P53365 341 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 GUCY2DQ02846 1103 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SPATA1Q5VX52 437 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 FAM180BQ6P0A1 224 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 KLC3Q6P597 504 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 ANO5Q75V66 913 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 ARRDC4Q8NCT1 418 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 ZNF473Q8WTR7 871 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 PTPRN2Q92932 1015 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 AZIN2Q96A70 460 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 TSNARE1Q96NA8 513 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PPP1R10Q96QC0 940 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 NUF2Q9BZD4 464 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 OSBPL7Q9BZF2 842 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 GHITMQ9H3K2 345 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 ZNF287Q9HBT7 754 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 DNAJC16Q9Y2G8 782 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SHANK2Q9UPX8 1470 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 HIP1O00291 1037 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 E2F3O00716 465 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 ORC4O43929 436 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 ICMTO60725 284 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 CBFA2T3O75081 653 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 NPPAP01160 153 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 MTHFD1P11586 935 aaKnown RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 ETS2P15036 469 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 HSD17B4P51659 736 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 CCNG2Q16589 344 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 KRT71Q3SY84 523 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 TRMT2AQ8IZ69 625 aaKnown RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 PROM2Q8N271 834 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 GBP5Q96PP8 586 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PLIN2Q99541 437 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 SHCBP1LQ9BZQ2 653 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 RAB21Q9UL25 225 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PCDHB13Q9Y5F0 798 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 MRPL42Q9Y6G3 142 aaKnown RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 DISP1Q96F81 1524 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 ZNF335Q9H4Z2 1342 aaPredicted RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 NCAM2O15394 837 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 ABCB1P08183 1280 aaPredicted RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 ZNF3P17036 446 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 RCVRNP35243 200 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 MRPS5P82675 430 aaKnown RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 PTK2Q05397 1052 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 NFE2L1Q14494 772 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 NDUFA5Q16718 116 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 RBM20Q5T481 1227 aaKnown RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 CYP4V2Q6ZWL3 525 aaPredicted RBP10.13□□□□□ -0.79
CDH1-205ENST00000562836 STRA8Q7Z7C7 330 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 IFNL3Q8IZI9 196 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 GMLQ99445 158 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 SPZ1Q9BXG8 430 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 CBX8Q9HC52 389 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PLSCR2Q9NRY7 297 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 GPSM3Q9Y4H4 160 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PCDHGA3Q9Y5H0 932 aa10.13□□□□□ -0.79
CDH1-205ENST00000562836 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 POM121CA8CG34 1229 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 YKT6O15498 198 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 ASMTLO95671 621 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 SOX5P35711 763 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 GGCXP38435 758 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 EPS15P42566 896 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 RELAQ04206 551 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 RIPK1Q13546 671 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 ALS2CLQ60I27 953 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 TRIM65Q6PJ69 517 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 C6orf89Q6UWU4 347 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 RUFY4Q6ZNE9 571 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 CCDC33Q8N5R6 958 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 FATE1Q969F0 183 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 SETDB2Q96T68 719 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 PIP5K1AQ99755 562 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 VTA1Q9NP79 307 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 MRPL40Q9NQ50 206 aaKnown RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 STIM2Q9P246 746 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 VANGL2Q9ULK5 521 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 AGAP1Q9UPQ3 857 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms