RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
COMMD4-206ENST00000562610 OSBPL7Q9BZF2 842 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 NKX2-4Q9H2Z4 354 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 TTYH1Q9H313 450 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-206ENST00000562610 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 TRPV2Q9Y5S1 764 aa18.14■□□□□ 0.49
COMMD4-206ENST00000562610 COL4A4P53420 1690 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-206ENST00000562610 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 HERC6Q8IVU3 1022 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 MTMR10Q9NXD2 777 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 NOL7Q9UMY1 257 aaKnown RBP18.13■□□□□ 0.49
COMMD4-206ENST00000562610 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 YBX2Q9Y2T7 364 aaKnown RBP18.13■□□□□ 0.49
COMMD4-206ENST00000562610 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-206ENST00000562610 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 MYO9BQ13459 2157 aa18.13■□□□□ 0.49
COMMD4-206ENST00000562610 PSMC5P62195 406 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 LPIN1Q14693 890 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 MTERF2Q49AM1 385 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 FBXO47Q5MNV8 452 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 MCTP1Q6DN14 999 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 TMCO2Q7Z6W1 182 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-206ENST00000562610 PHOSPHO2Q8TCD6 241 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 APBB2Q92870 758 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 PPP1R16BQ96T49 567 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 ZBED2Q9BTP6 218 aa18.12■□□□□ 0.49
COMMD4-206ENST00000562610 TMEM150BA6NC51 233 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 H3BQV1 296 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 MAGEB2O15479 319 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
COMMD4-206ENST00000562610 AMHP03971 560 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 MYOGP15173 224 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 TXKP42681 527 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 QARSP47897 775 aaKnown RBP18.11■□□□□ 0.49
COMMD4-206ENST00000562610 CLCN3P51790 818 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 SPIRE1Q08AE8 756 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 TBC1D8BQ0IIM8 1120 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 TTC38Q5R3I4 469 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 FAM117BQ6P1L5 589 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 TSHZ1Q6ZSZ6 1077 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 MYOCDQ8IZQ8 938 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 NME8Q8N427 588 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 GUCD1Q96NT3 240 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 MAP7D2Q96T17 732 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 LXNQ9BS40 222 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 CELF4Q9BZC1 486 aaKnown RBP18.11■□□□□ 0.49
COMMD4-206ENST00000562610 SEMA6BQ9H3T3 888 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 ZNF576Q9H609 170 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-206ENST00000562610 SLC28A3Q9HAS3 691 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 PCDHA12Q9UN75 941 aa18.11■□□□□ 0.49
COMMD4-206ENST00000562610 CDH23Q9H251 3354 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 RALGAPA2Q2PPJ7 1873 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 TLL1O43897 1013 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 VTNP04004 478 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 CA3P07451 260 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 CYP4A11Q02928 519 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 EPHA7Q15375 998 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 PLA2G4FQ68DD2 849 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 EFCAB12Q6NXP0 572 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
COMMD4-206ENST00000562610 KIAA0319LQ8IZA0 1049 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 LRRC71Q8N4P6 559 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 SH2D3AQ9BRG2 576 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 TMEM60Q9H2L4 133 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
COMMD4-206ENST00000562610 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 KDM3AQ9Y4C1 1321 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 P4HBP07237 508 aaKnown RBP18.09■□□□□ 0.49
COMMD4-206ENST00000562610 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.49
COMMD4-206ENST00000562610 TMOD1P28289 359 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 CD52P31358 61 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 PAK2Q13177 524 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-206ENST00000562610 ZNF174Q15697 407 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 MYH15Q9Y2K3 1946 aa18.09■□□□□ 0.49
COMMD4-206ENST00000562610 TTC3P53804 2025 aa18.08■□□□□ 0.49
COMMD4-206ENST00000562610 POTEMA6NI47 508 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
COMMD4-206ENST00000562610 NBR1Q14596 966 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 KIZQ2M2Z5 673 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 ANO5Q75V66 913 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 USP38Q8NB14 1042 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 SCLT1Q96NL6 688 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 MTMR9Q96QG7 549 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 CDX2Q99626 313 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-206ENST00000562610 OSMRQ99650 979 aa18.08■□□□□ 0.48
COMMD4-206ENST00000562610 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
COMMD4-206ENST00000562610 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms