RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 USP6NLQ92738 828 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-205ENST00000562310 TRIM47Q96LD4 638 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 MED15Q96RN5 788 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 TSG101Q99816 390 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 KATNBL1Q9H079 304 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 AZI2Q9H6S1 392 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 BCAS3Q9H6U6 928 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 SEPT9Q9UHD8 586 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-205ENST00000562310 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 PCDHA2Q9Y5H9 948 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
COMMD4-205ENST00000562310 EIF3DO15371 548 aaKnown RBP eCLIP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 USO1O60763 962 aaKnown RBP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 LGR5O75473 907 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 FGFR1OPO95684 399 aaKnown RBP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 TCF7P36402 384 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 SLC26A2P50443 739 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 FANCCQ00597 558 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-205ENST00000562310 ALCAMQ13740 583 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 TTI2Q6NXR4 508 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 ANO5Q75V66 913 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 FAM114A1Q8IWE2 563 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 SLC17A8Q8NDX2 589 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 MCPH1Q8NEM0 835 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 SPATA33Q96N06 139 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 ZIC5Q96T25 663 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 GPR20Q99678 358 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 CFHR5Q9BXR6 569 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 THAP9Q9H5L6 903 aa15.81■□□□□ 0.12
COMMD4-205ENST00000562310 GOLGA6L6A8MZA4 724 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 SORBS3O60504 671 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 HIP1RO75146 1068 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 DGAT1O75907 488 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 STBD1O95210 358 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 SERPINC1P01008 464 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 MAPTP10636 758 aaKnown RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 STAT5BP51692 787 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 ARHGAP1Q07960 439 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 MAPK7Q13164 816 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 ACVR2BQ13705 512 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 BMT2Q1RMZ1 405 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 UTP14CQ5TAP6 766 aaKnown RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 PLA2G4FQ68DD2 849 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 EPM2AIP1Q7L775 607 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 CTAGE1Q96RT6 745 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 MRPL44Q9H9J2 332 aaKnown RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 PDGFCQ9NRA1 345 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 NRBP2Q9NSY0 501 aa15.8■□□□□ 0.12
COMMD4-205ENST00000562310 LARSQ9P2J5 1176 aaKnown RBP15.8■□□□□ 0.12
COMMD4-205ENST00000562310 RSPH10B2B2RC85 870 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 AOC2O75106 756 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 RSPH10BP0C881 870 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 EEF1GP26641 437 aaKnown RBP15.79■□□□□ 0.12
COMMD4-205ENST00000562310 RFC5P40937 340 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 DUSP28Q4G0W2 176 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 PLPPR4Q7Z2D5 763 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 FAM178BQ8IXR5 827 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 CSGALNACT2Q8N6G5 542 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 PPTC7Q8NI37 304 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 KIFAP3Q92845 792 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 NIFKQ9BYG3 293 aaKnown RBP15.79■□□□□ 0.12
COMMD4-205ENST00000562310 C17orf75Q9HAS0 396 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 ATP6V0A4Q9HBG4 840 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 CYP26B1Q9NR63 512 aa15.79■□□□□ 0.12
COMMD4-205ENST00000562310 SAMSN1Q9NSI8 373 aaKnown RBP15.79■□□□□ 0.12
COMMD4-205ENST00000562310 MAGEC2Q9UBF1 373 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-205ENST00000562310 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-205ENST00000562310 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 PLS3P13797 630 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 MAP2K2P36507 400 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 NPEPPSP55786 919 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 RTP1P59025 263 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-205ENST00000562310 KIF22Q14807 665 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 ODR4Q5SWX8 454 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 EXOC8Q8IYI6 725 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 DAW1Q8N136 415 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 SCFD1Q8WVM8 642 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 TRIM44Q96DX7 344 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-205ENST00000562310 PCYT2Q99447 389 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 DUSP9Q99956 384 aaKnown RBP15.78■□□□□ 0.12
COMMD4-205ENST00000562310 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 TBC1D7Q9P0N9 293 aa15.78■□□□□ 0.12
COMMD4-205ENST00000562310 IFNKQ9P0W0 207 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms