RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 COL1A2P08123 1366 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ESYT2A0FGR8 921 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 MGEA5O60502 916 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 TBX10O75333 385 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ITGB1P05556 798 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZP2Q05996 745 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PDXDC2PQ6P474 469 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 BRF1Q92994 677 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ERVK-5Q9HDB9 667 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 GINS2Q9Y248 185 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 HCN4Q9Y3Q4 1203 aa18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NOC2LQ9Y3T9 749 aaKnown RBP18.98■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 LINC01565O15544 149 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 STAG3L1P0CL83 205 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 FGD1P98174 961 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NFX1Q12986 1120 aaKnown RBP18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CLUL1Q15846 466 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZNF484Q5JVG2 852 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 MIS18BP1Q6P0N0 1132 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 KLHL23Q8NBE8 558 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 JAKMIP1Q96N16 626 aaKnown RBP18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ZNF577Q9BSK1 485 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PRKAG3Q9UGI9 489 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 FAM50BQ9Y247 325 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 C19orf67A6NJJ6 358 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 C22orf31O95567 290 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 HSPA4P34932 840 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 IRS1P35568 1242 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SARSP49591 514 aaKnown RBP18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 NAALADL2Q58DX5 795 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ADGRD2Q7Z7M1 963 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 REXO1Q8N1G1 1221 aaKnown RBP18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SPPL3Q8TCT6 385 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PHKBQ93100 1093 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 PPP1R16BQ96T49 567 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 C6orf50Q9HD87 102 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 ARIH1Q9Y4X5 557 aaPredicted RBP18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 MAFBQ9Y5Q3 323 aaPredicted RBP18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 SNX14Q9Y5W7 946 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 MYO7AQ13402 2215 aa18.96■□□□□ 0.63
VPS9D1-AS1-201ENST00000562298 FNDC1Q4ZHG4 1894 aaPredicted RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PRPF3O43395 683 aaKnown RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 MBTPS2O43462 519 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RPS6KA5O75582 802 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 IBSPP21815 317 aaPredicted RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SETQ01105 290 aaPredicted RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SMAD2Q15796 467 aaKnown RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ZNF746Q6NUN9 644 aaPredicted RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ADHFE1Q8IWW8 467 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RASGRP4Q8TDF6 673 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 BBXQ8WY36 941 aaPredicted RBP18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RGS18Q9NS28 235 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 TBC1D22BQ9NU19 505 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 LRFN2Q9ULH4 789 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ST3GAL5Q9UNP4 418 aa18.95■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PRR33A8MZF0 331 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ALADP13716 330 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ADAM15Q13444 863 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 NTRK3Q16288 839 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 KIZQ2M2Z5 673 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PRR16Q569H4 304 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 BLOC1S2Q6QNY1 142 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 TRMT1LQ7Z2T5 733 aaKnown RBP18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 FBXL16Q8N461 479 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CCDC12Q8WUD4 166 aaPredicted RBP18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 POF1BQ8WVV4 589 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 LENG9Q96B70 501 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 OSMRQ99650 979 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ADAM2Q99965 735 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 AGXT2Q9BYV1 514 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PCDHB7Q9Y5E2 793 aa18.94■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 EVPLQ92817 2033 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 C9IYK1 514 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 DCXO43602 365 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 EDIL3O43854 480 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 GPR32O75388 356 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 VTNP04004 478 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CIITAP33076 1130 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 FAM102BQ5T8I3 360 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 FAM228AQ86W67 206 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 MSLNLQ96KJ4 702 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 GABBR1Q9UBS5 961 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PCDHGC5Q9Y5F6 944 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PCDHA10Q9Y5I2 948 aa18.93■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 DENND3A2RUS2 1198 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 GPR182O15218 404 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PSAPP07602 524 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RPS6KB1P23443 525 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 GNA11P29992 359 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CRYBB1P53674 252 aaPredicted RBP18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SMAD4Q13485 552 aaKnown RBP18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 FAM43BQ6ZT52 329 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms