RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 SRPK1Q96SB4 655 aaKnown RBP7.15□□□□□ -1.26
UBR1-203ENST00000562173 LNPKQ9C0E8 428 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 RC3H2Q9HBD1 1191 aaKnown RBP7.15□□□□□ -1.26
UBR1-203ENST00000562173 LRP2BPQ9P2M1 347 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 POLLQ9UGP5 575 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 ADAMTS6Q9UKP5 1117 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 MINPP1Q9UNW1 487 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 ATP6V0A2Q9Y487 856 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 KIF7Q2M1P5 1343 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 TRBV23OR9-2A0A075B6M9 112 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 FITM1A5D6W6 292 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 AURKAO14965 403 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 ITGAVP06756 1048 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 CD3EP07766 207 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 SNRPA1P09661 255 aaKnown RBP7.14□□□□□ -1.27
UBR1-203ENST00000562173 ZGLP1P0C6A0 271 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 KIR2DL1P43626 348 aaPredicted RBP7.14□□□□□ -1.27
UBR1-203ENST00000562173 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
UBR1-203ENST00000562173 GPSM2P81274 684 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 KIAA2012Q0VF49 1180 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 PPP2R5DQ14738 602 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 NR0B2Q15466 257 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 GOLGA2P5Q9HBQ8 144 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 TNFRSF10DQ9UBN6 386 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 BACE2Q9Y5Z0 518 aa7.14□□□□□ -1.27
UBR1-203ENST00000562173 FGF10O15520 208 aaPredicted RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 KCNH1O95259 989 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 SCG5P05408 212 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 RAC2P15153 192 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 RPL10P27635 214 aaKnown RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 GTF2IRD2BQ6EKJ0 949 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 DPP8Q6V1X1 898 aaPredicted RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 ATG4DQ86TL0 474 aaPredicted RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 GTF2IRD2Q86UP8 949 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 KSR1Q8IVT5 923 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 OXR1Q8N573 874 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 LRRN4CLQ8ND94 238 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 PPP1R14AQ96A00 147 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 MRFAP1L1Q96HT8 127 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 RBM17Q96I25 401 aaKnown RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 CRAMP1Q96RY5 1269 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 G6PC3Q9BUM1 346 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 RTFDC1Q9BY42 306 aaPredicted RBP7.13□□□□□ -1.27
UBR1-203ENST00000562173 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 ZMYM5Q9UJ78 669 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 A0A1B0GUL6 1792 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 LAMB1P07942 1786 aa7.13□□□□□ -1.27
UBR1-203ENST00000562173 SSC5DA1L4H1 1573 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 DNAJC25-GNG10A0A024R161 153 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 STXBP3O00186 592 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 BIN1O00499 593 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 CA12O43570 354 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 ECE2O60344 883 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 FKTNO75072 461 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 HPXP02790 462 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 CAPNS1P04632 268 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 AIMP1Q12904 312 aaKnown RBP7.12□□□□□ -1.27
UBR1-203ENST00000562173 HSP90AA2PQ14568 343 aaPredicted RBP7.12□□□□□ -1.27
UBR1-203ENST00000562173 RALGPS1Q5JS13 557 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 LILRA2Q8N149 483 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 HHIPL1Q96JK4 782 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 FCRL3Q96P31 734 aaPredicted RBP7.12□□□□□ -1.27
UBR1-203ENST00000562173 TEX13AQ9BXU3 409 aaPredicted RBP7.12□□□□□ -1.27
UBR1-203ENST00000562173 ZSWIM4Q9H7M6 989 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 CYP26B1Q9NR63 512 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 CTNND2Q9UQB3 1225 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 ZNF652Q9Y2D9 606 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 KNSTRNQ9Y448 316 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
UBR1-203ENST00000562173 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 CPP00450 1065 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 GSTM1P09488 218 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 IFNGR1P15260 489 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 EIF2S2P20042 333 aaKnown RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 HOXC12P31275 282 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 EIF4A1P60842 406 aaKnown RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 PPP2R2AP63151 447 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 SSRP1Q08945 709 aaKnown RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 BMS1Q14692 1282 aaKnown RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 CCDC144BQ3MJ40 725 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 DPH6Q7L8W6 267 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 SPPL2CQ8IUH8 684 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 CD99L2Q8TCZ2 262 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 COPS5Q92905 334 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 CLMNQ96JQ2 1002 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 AARSD1Q9BTE6 412 aaKnown RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 SPATA9Q9BWV2 254 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 ADAMTS10Q9H324 1103 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 PRDM7Q9NQW5 492 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms