RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 BCL6BQ8N143 479 aaPredicted RBP3.52□□□□□ -1.85
CHD9-204ENST00000561869 CHST14Q8NCH0 376 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 WWC2-AS2Q96NR7 200 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 GPR20Q99678 358 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 C1QTNF3Q9BXJ4 246 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 CARD11Q9BXL7 1154 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 OR10A5Q9H207 317 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 SEC61A2Q9H9S3 476 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 SMPD4Q9NXE4 827 aa3.52□□□□□ -1.85
CHD9-204ENST00000561869 NPEPPSL1A6NEC2 478 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 PATE3B3GLJ2 98 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 CBX4O00257 560 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 MATN2O00339 956 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 MATN3O15232 486 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 AKAP8O43823 692 aaKnown RBP3.51□□□□□ -1.85
CHD9-204ENST00000561869 OPA1O60313 960 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 MAFO75444 373 aaPredicted RBP3.51□□□□□ -1.85
CHD9-204ENST00000561869 ADCY8P40145 1251 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 USP10Q14694 798 aaKnown RBP3.51□□□□□ -1.85
CHD9-204ENST00000561869 CDSNQ15517 529 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 TBR1Q16650 682 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 WDR72Q3MJ13 1102 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 CDCA2Q69YH5 1023 aaPredicted RBP3.51□□□□□ -1.85
CHD9-204ENST00000561869 TMEM200BQ69YZ2 307 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 JAZF1Q86VZ6 243 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 SYNPOQ8N3V7 929 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 LOXL4Q96JB6 756 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 C8orf49Q96NF6 230 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 ORAI3Q9BRQ5 295 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 B4GALT6Q9UBX8 382 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 CD2APQ9Y5K6 639 aa3.51□□□□□ -1.85
CHD9-204ENST00000561869 PTPDC1A2A3K4 754 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 HIP1RO75146 1068 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 APPP05067 770 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 JMJD7P0C870 316 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 ZNF20P17024 532 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 FNTBP49356 437 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 ALDH6A1Q02252 535 aaKnown RBP3.5□□□□□ -1.85
CHD9-204ENST00000561869 MOGSQ13724 837 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 NFYCQ13952 458 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 NOLC1Q14978 699 aaKnown RBP eCLIP3.5□□□□□ -1.85
CHD9-204ENST00000561869 TCEA2Q15560 299 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 C21orf62-AS1Q17RA5 79 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 RNF151Q2KHN1 245 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 PIK3R6Q5UE93 754 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 C16orf86Q6ZW13 317 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 CIR1Q86X95 450 aaPredicted RBP3.5□□□□□ -1.85
CHD9-204ENST00000561869 HOMER1Q86YM7 354 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 HIPK4Q8NE63 616 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 CFHR4Q92496 578 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 C16orf92Q96LL3 132 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 GNRHR2Q96P88 292 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 MTFR1LQ9H019 292 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 INTS7Q9NVH2 962 aaKnown RBP3.5□□□□□ -1.85
CHD9-204ENST00000561869 FANCLQ9NW38 375 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 MAGEC2Q9UBF1 373 aaPredicted RBP3.5□□□□□ -1.85
CHD9-204ENST00000561869 ST6GALNAC2Q9UJ37 374 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 FBXO10Q9UK96 956 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 CDC42EP3Q9UKI2 254 aa3.5□□□□□ -1.85
CHD9-204ENST00000561869 MRPL42Q9Y6G3 142 aaKnown RBP3.5□□□□□ -1.85
CHD9-204ENST00000561869 A0A0G2JNJ9 132 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 C1QTNF3-AMACRE9PGA6 284 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 FOXS1O43638 330 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 KRT37O76014 449 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 POU3F2P20265 443 aaPredicted RBP3.49□□□□□ -1.85
CHD9-204ENST00000561869 KCNQ1P51787 676 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 KIF11P52732 1056 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 ZXDAP98168 799 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 DUSP8Q13202 625 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 TCTN3Q6NUS6 607 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 KIAA1958Q8N8K9 716 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 Q8TCH9 128 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 NEIL1Q96FI4 390 aaPredicted RBP3.49□□□□□ -1.85
CHD9-204ENST00000561869 SCYL1Q96KG9 808 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 LMF1Q96S06 567 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 FOXB1Q99853 325 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 KIAA1683Q9H0B3 1180 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 Q9UFV3 132 aa3.49□□□□□ -1.85
CHD9-204ENST00000561869 ZNF623O75123 536 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 PRLP01236 227 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 HMGCRP04035 888 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ATP2A2P16615 1042 aaKnown RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 PTX3P26022 381 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 APEX1P27695 318 aaKnown RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 RGS3P49796 1198 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 RRADP55042 308 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ANTXR2P58335 489 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 HGFACQ04756 655 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 R3HDM1Q15032 1099 aaKnown RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 PCOLCEQ15113 449 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 CFAP100Q494V2 611 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ZMAT1Q5H9K5 638 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 AGBL4Q5VU57 503 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 GRAMD4Q6IC98 578 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ESRP1Q6NXG1 681 aaKnown RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 UBE2R2Q712K3 238 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 KIAA0907Q7Z7F0 614 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 TAX1BP1Q86VP1 789 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 KIF18BQ86Y91 864 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 IFNL2Q8IZJ0 200 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms