RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TARBP2Q15633 366 aaKnown RBP23.3■■□□□ 1.32
TPM1-232ENST00000561425 CKAP2LQ8IYA6 745 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 SP7Q8TDD2 431 aaPredicted RBP23.3■■□□□ 1.32
TPM1-232ENST00000561425 CEP89Q96ST8 783 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 GAS2L1Q99501 681 aaPredicted RBP23.3■■□□□ 1.32
TPM1-232ENST00000561425 ZBED2Q9BTP6 218 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 SH2B1Q9NRF2 756 aaPredicted RBP23.3■■□□□ 1.32
TPM1-232ENST00000561425 NRBP2Q9NSY0 501 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 VAV3Q9UKW4 847 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 INSL6Q9Y581 213 aa23.3■■□□□ 1.32
TPM1-232ENST00000561425 FAM205CA6NFA0 338 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 BTBD18B2RXH4 712 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 ENPP3O14638 875 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 MAGEB2O15479 319 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 OATP04181 439 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 MIER3Q7Z3K6 550 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 CRIPAKQ8N1N5 446 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 SLC17A8Q8NDX2 589 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 NIFKQ9BYG3 293 aaKnown RBP23.29■■□□□ 1.32
TPM1-232ENST00000561425 SIP14410 1827 aa23.29■■□□□ 1.32
TPM1-232ENST00000561425 EML1O00423 815 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 CHMP2AO43633 222 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 RTN4RL1Q86UN2 441 aaPredicted RBP23.28■■□□□ 1.32
TPM1-232ENST00000561425 CCDC83Q8IWF9 413 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 DIS3L2Q8IYB7 885 aaKnown RBP23.28■■□□□ 1.32
TPM1-232ENST00000561425 MYOCDQ8IZQ8 938 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 BRMS1Q9HCU9 246 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 MICAL3Q7RTP6 2002 aa23.28■■□□□ 1.32
TPM1-232ENST00000561425 EPOPA6NHQ4 379 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 M0QZ92 97 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 CCNT1O60563 726 aaKnown RBP23.27■■□□□ 1.32
TPM1-232ENST00000561425 ERVK-21P61565 698 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 PRKCEQ02156 737 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 RABEP1Q15276 862 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 SPRED2Q7Z698 418 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 CDHR5Q9HBB8 845 aa23.27■■□□□ 1.32
TPM1-232ENST00000561425 LINC01553A4QN01 128 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 GPR32O75388 356 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 CD52P31358 61 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 SPIRE1Q08AE8 756 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 XKR3Q5GH77 459 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 ZNF710Q8N1W2 664 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 FTHL17Q9BXU8 183 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 PADI3Q9ULW8 664 aa23.26■■□□□ 1.31
TPM1-232ENST00000561425 CHD7Q9P2D1 2997 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 HMGN5P82970 282 aaKnown RBP23.25■■□□□ 1.31
TPM1-232ENST00000561425 TRIM29Q14134 588 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 TMEM40Q8WWA1 233 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 LINC01599Q8WXQ3 324 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 COL4A6Q14031 1691 aa23.25■■□□□ 1.31
TPM1-232ENST00000561425 IGKV6-21A0A0C4DH24 114 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 RFXAPO00287 272 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 LPXNO60711 386 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 CRYBB1P53674 252 aaPredicted RBP23.24■■□□□ 1.31
TPM1-232ENST00000561425 PSMC5P62195 406 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 EFCAB12Q6NXP0 572 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 FAM117BQ6P1L5 589 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 TRMT1LQ7Z2T5 733 aaKnown RBP23.24■■□□□ 1.31
TPM1-232ENST00000561425 SLFN12Q8IYM2 578 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 FBXO18Q8NFZ0 1043 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 TSPYL2Q9H2G4 693 aaPredicted RBP23.24■■□□□ 1.31
TPM1-232ENST00000561425 TMX1Q9H3N1 280 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 CERS4Q9HA82 394 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 RC3H2Q9HBD1 1191 aaKnown RBP23.24■■□□□ 1.31
TPM1-232ENST00000561425 ERVK-5Q9HDB9 667 aa23.24■■□□□ 1.31
TPM1-232ENST00000561425 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
TPM1-232ENST00000561425 WNT7AO00755 349 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 EPHA7Q15375 998 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 ARNTL2Q8WYA1 636 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 MTMR9Q96QG7 549 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 TGS1Q96RS0 853 aaKnown RBP23.23■■□□□ 1.31
TPM1-232ENST00000561425 ADAMTS10Q9H324 1103 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 NOC2LQ9Y3T9 749 aaKnown RBP23.23■■□□□ 1.31
TPM1-232ENST00000561425 MTCH2Q9Y6C9 303 aa23.23■■□□□ 1.31
TPM1-232ENST00000561425 WDR81Q562E7 1941 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 P4HBP07237 508 aaKnown RBP23.22■■□□□ 1.31
TPM1-232ENST00000561425 QARSP47897 775 aaKnown RBP23.22■■□□□ 1.31
TPM1-232ENST00000561425 PAK2Q13177 524 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 ANO5Q75V66 913 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.22■■□□□ 1.31
TPM1-232ENST00000561425 METTL13Q8N6R0 699 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 ZNF689Q96CS4 500 aaPredicted RBP23.22■■□□□ 1.31
TPM1-232ENST00000561425 C8orf76Q96K31 380 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 FOXP1Q9H334 677 aaPredicted RBP23.22■■□□□ 1.31
TPM1-232ENST00000561425 SUGCTQ9HAC7 445 aa23.22■■□□□ 1.31
TPM1-232ENST00000561425 UPP2O95045 317 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 BAG4O95429 457 aaKnown RBP23.21■■□□□ 1.31
TPM1-232ENST00000561425 VTNP04004 478 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 IGFBP4P22692 258 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 TMOD1P28289 359 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 CLCN3P51790 818 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 GRB10Q13322 594 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 BANK1Q8NDB2 785 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 TBC1D32Q96NH3 1257 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 LMCD1Q9NZU5 365 aa23.21■■□□□ 1.31
TPM1-232ENST00000561425 WRAP73Q9P2S5 460 aaPredicted RBP23.21■■□□□ 1.31
TPM1-232ENST00000561425 MAFO75444 373 aaPredicted RBP23.2■■□□□ 1.3
TPM1-232ENST00000561425 RPS6KA5O75582 802 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms