RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 ACVRL1P37023 503 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 MEOX1P50221 254 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 SEC23AQ15436 765 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 AGBL4Q5VU57 503 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 KANK2Q63ZY3 851 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 USP30Q70CQ3 517 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 HIPK4Q8NE63 616 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 GBP4Q96PP9 640 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 MRPL4Q9BYD3 311 aaKnown RBP7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 KIAA1683Q9H0B3 1180 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 OR10A5Q9H207 317 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 Q9UFV3 132 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 PUF60Q9UHX1 559 aaKnown RBP7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 ASB1Q9Y576 335 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 SLC30A1Q9Y6M5 507 aa7.31□□□□□ -1.24
HMBOX1-216ENST00000561377 HIP1RO75146 1068 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 RPS19P39019 145 aaKnown RBP7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 CD83Q01151 205 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 LRSAM1Q6UWE0 723 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 LARP4Q71RC2 724 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 JMYQ8N9B5 988 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 CALML6Q8TD86 181 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 THAP3Q8WTV1 239 aaPredicted RBP7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 ASB15Q8WXK1 588 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 FAM89AQ96GI7 184 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 OR10A2Q9H208 303 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 CDC42EP3Q9UKI2 254 aa7.3□□□□□ -1.24
HMBOX1-216ENST00000561377 ACO1P21399 889 aaKnown RBP7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 SDHAP31040 664 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 HMGA2P52926 109 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 PCOLCEQ15113 449 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 TBR1Q16650 682 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 TRIM68Q6AZZ1 485 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 GRAMD4Q6IC98 578 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 OVCH1Q7RTY7 1134 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 DLG3Q92796 817 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 OR14A2Q96R54 314 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 PLA2G12BQ9BX93 195 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 ZNF341Q9BYN7 854 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 B3GALT1Q9Y5Z6 326 aa7.29□□□□□ -1.24
HMBOX1-216ENST00000561377 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 MATN2O00339 956 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 MRE11P49959 708 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 MAP3K12Q12852 859 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 DUSP8Q13202 625 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 MOGSQ13724 837 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 NRN1LQ496H8 165 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 RNF207Q6ZRF8 634 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 BRAPQ7Z569 592 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 FILIP1Q7Z7B0 1213 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 C2orf69Q8N8R5 385 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 SCLYQ96I15 445 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
HMBOX1-216ENST00000561377 TCRBV16S1A1N1A0A5B0 115 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 KCNQ2O43526 872 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 FOXE3Q13461 319 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 TMEM132BQ14DG7 1078 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 USP39Q53GS9 565 aaKnown RBP7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 TM4SF20Q53R12 229 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 FSTL4Q6MZW2 842 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 CFHR4Q92496 578 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 MRIQ9BWK5 157 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 HS3ST3A1Q9Y663 406 aa7.27□□□□□ -1.25
HMBOX1-216ENST00000561377 MAFO75444 373 aaPredicted RBP7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 SLPIP03973 132 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 APEX1P27695 318 aaKnown RBP7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 IRF9Q00978 393 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 TMEM177Q53S58 311 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 MIIPQ5JXC2 388 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 MAMDC4Q6UXC1 1216 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 Q6ZSN1 163 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 NELFAQ9H3P2 528 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 FAM184BQ9ULE4 1060 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 PTCH2Q9Y6C5 1203 aa7.26□□□□□ -1.25
HMBOX1-216ENST00000561377 RASSF10A6NK89 507 aa7.25□□□□□ -1.25
HMBOX1-216ENST00000561377 GOLGA6L22H0YM25 854 aa7.25□□□□□ -1.25
HMBOX1-216ENST00000561377 FGD2Q7Z6J4 655 aa7.25□□□□□ -1.25
HMBOX1-216ENST00000561377 PMFBP1Q8TBY8 1022 aa7.25□□□□□ -1.25
HMBOX1-216ENST00000561377 PCED1AQ9H1Q7 454 aa7.25□□□□□ -1.25
HMBOX1-216ENST00000561377 PMS2P1A4D2B8 440 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 SUV39H1O43463 412 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 KCNA6P17658 529 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 STAT5BP51692 787 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 ALDH6A1Q02252 535 aaKnown RBP7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 CATSPEREQ5SY80 951 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 OR14K1Q8NGZ2 314 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 ERCC4Q92889 916 aaPredicted RBP7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 E2F7Q96AV8 911 aa7.24□□□□□ -1.25
HMBOX1-216ENST00000561377 ZNF503Q96F45 646 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms