RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
USP3-219ENST00000561326 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
USP3-219ENST00000561326 SLC39A2Q9NP94 309 aa11.42□□□□□ -0.58
USP3-219ENST00000561326 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
USP3-219ENST00000561326 NRBP1Q9UHY1 535 aa11.42□□□□□ -0.58
USP3-219ENST00000561326 GDAQ9Y2T3 454 aa11.42□□□□□ -0.58
USP3-219ENST00000561326 IGSF9BQ9UPX0 1349 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 FRMD3A2A2Y4 597 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 ZNF862O60290 1169 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 LGR5O75473 907 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 DGAT1O75907 488 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 FGFR1OPO95684 399 aaKnown RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 OATP04181 439 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 EHHADHQ08426 723 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 STK4Q13043 487 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 HSDL1Q3SXM5 330 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 BRDTQ58F21 947 aaPredicted RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 ANO5Q75V66 913 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 TRMT1LQ7Z2T5 733 aaKnown RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 SMYD4Q8IYR2 804 aaPredicted RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 MYOCDQ8IZQ8 938 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 SLC17A8Q8NDX2 589 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 MCPH1Q8NEM0 835 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 RUSC1Q9BVN2 902 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 MRPL44Q9H9J2 332 aaKnown RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 CYP26B1Q9NR63 512 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
USP3-219ENST00000561326 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 CTNND2Q9UQB3 1225 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 MAPK8IP1Q9UQF2 711 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 Q9Y3F1 56 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
USP3-219ENST00000561326 EMSYQ7Z589 1322 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 USO1O60763 962 aaKnown RBP11.4□□□□□ -0.58
USP3-219ENST00000561326 HIP1RO75146 1068 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 CCNE1P24864 410 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 RFC5P40937 340 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 FLT3LGP49771 235 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 SMTNP53814 917 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
USP3-219ENST00000561326 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 DGKDQ16760 1214 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 ODR4Q5SWX8 454 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 FAM178BQ8IXR5 827 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 ANKRD20A12PQ8NF67 263 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 OR6J1Q8NGC5 347 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 NOC3LQ8WTT2 800 aaKnown RBP11.4□□□□□ -0.58
USP3-219ENST00000561326 KIFAP3Q92845 792 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 COPS5Q92905 334 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 P2RX5Q93086 422 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 TSG101Q99816 390 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 TRIM5Q9C035 493 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 OLFML3Q9NRN5 406 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 SAGE1Q9NXZ1 904 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 ERAP1Q9NZ08 941 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
USP3-219ENST00000561326 HBP1O60381 514 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 FKTNO75072 461 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 STBD1O95210 358 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 TPM3P06753 285 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
USP3-219ENST00000561326 MAPTP10636 758 aaKnown RBP11.39□□□□□ -0.59
USP3-219ENST00000561326 SMPD1P17405 629 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 CYP2C19P33261 490 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 ABCD1P33897 745 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 ZNF131P52739 623 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 POLGP54098 1239 aaPredicted RBP11.39□□□□□ -0.59
USP3-219ENST00000561326 NPEPPSP55786 919 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 STX17P56962 302 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 LRRC63Q05C16 580 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 CCDC173Q0VFZ6 552 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 ALCAMQ13740 583 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 NCAPHQ15003 741 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 CCL14Q16627 93 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 PLA2G4FQ68DD2 849 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 FOXR2Q6PJQ5 311 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 SARM1Q6SZW1 724 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 FAM114A1Q8IWE2 563 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 KIAA0895Q8NCT3 520 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 AFG1LQ8WV93 481 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 IFT74Q96LB3 600 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
USP3-219ENST00000561326 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
USP3-219ENST00000561326 FLRT1Q9NZU1 646 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms