RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 NECAB1Q8N987 351 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 IL17RAQ96F46 866 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 TEKT3Q9BXF9 490 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 UNC45AQ9H3U1 944 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 C22orf31O95567 290 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 NONOQ15233 471 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 SKIV2LQ15477 1246 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 UGCGQ16739 394 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 KRT25Q7Z3Z0 450 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 PPP1R16BQ96T49 567 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 RIT2Q99578 217 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 CELF4Q9BZC1 486 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 DISC1Q9NRI5 854 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 GINS2Q9Y248 185 aa19.44■□□□□ 0.7
CDC42BPB-208ENST00000561271 PRKCEQ02156 737 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 PAK2Q13177 524 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 ME3Q16798 604 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 Q4G0T1 1027 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 FBXO22Q8NEZ5 403 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 GTF3C6Q969F1 213 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 ORC3Q9UBD5 711 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 KDM3AQ9Y4C1 1321 aa19.43■□□□□ 0.7
CDC42BPB-208ENST00000561271 XIRP2A4UGR9 3374 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 CYP3A7-CYP3A51PA0A087WV96 503 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 CCDC194A0A1B0GVG4 234 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 SLC37A4O43826 429 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 ZNF862O60290 1169 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 PSMD10O75832 226 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 OATP04181 439 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 CYP3A7P24462 503 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 NEK4P51957 841 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 JAK3P52333 1124 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 TJAP1Q5JTD0 557 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 KIAA0319LQ8IZA0 1049 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 OXER1Q8TDS5 423 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 FAM167AQ96KS9 214 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 MBOAT7Q96N66 472 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 PADI3Q9ULW8 664 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 SQORQ9Y6N5 450 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 ADGRA3Q8IWK6 1321 aa19.42■□□□□ 0.7
CDC42BPB-208ENST00000561271 ENPP3O14638 875 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 XBP1P17861 261 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 SFNP31947 248 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 CLCN3P51790 818 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 LETM2Q2VYF4 491 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 MOXD1Q6UVY6 613 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 MIER3Q7Z3K6 550 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 NME8Q8N427 588 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 METTL13Q8N6R0 699 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 TMEM40Q8WWA1 233 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 TSPYL2Q9H2G4 693 aaPredicted RBP19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 CDHR5Q9HBB8 845 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 RC3H2Q9HBD1 1191 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 DDX25Q9UHL0 483 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
CDC42BPB-208ENST00000561271 FAM205CA6NFA0 338 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 VTNP04004 478 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 FOSBP53539 338 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 TFF2Q03403 129 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 EPC2Q52LR7 807 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 PIK3AP1Q6ZUJ8 805 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 ATXN2LQ8WWM7 1075 aaKnown RBP19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 TMX1Q9H3N1 280 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 BDP1A6H8Y1 2624 aa19.4■□□□□ 0.7
CDC42BPB-208ENST00000561271 EIF5BO60841 1220 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 IBSPP21815 317 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 NEK8Q86SG6 692 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 RTN4RL1Q86UN2 441 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 LRRC71Q8N4P6 559 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 NSUN7Q8NE18 718 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 SAMD11Q96NU1 681 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 OSMRQ99650 979 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 FTHL17Q9BXU8 183 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 ERVK-5Q9HDB9 667 aa19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-208ENST00000561271 TMEM150BA6NC51 233 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 JAK2O60674 1132 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 NR5A1Q13285 461 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 B3GNT9Q6UX72 402 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 TMEM192Q8IY95 271 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 FIBCD1Q8N539 461 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 RDM1Q8NG50 284 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 WASF1Q92558 559 aa19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 SEPT9Q9UHD8 586 aaPredicted RBP19.38■□□□□ 0.69
CDC42BPB-208ENST00000561271 MGEA5O60502 916 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 CTNNB1P35222 781 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 KRT2P35908 639 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms