RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RPA1P27694 616 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 KCNJ6P48051 423 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
TPM1-229ENST00000561242 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
TPM1-229ENST00000561242 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
TPM1-229ENST00000561242 AMPD3Q01432 767 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 SLC39A14Q15043 492 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 RRAGBQ5VZM2 374 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 MFSD5Q6N075 450 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 PSRC1Q6PGN9 363 aaPredicted RBP11.94□□□□□ -0.5
TPM1-229ENST00000561242 MTHFD1LQ6UB35 978 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 CCDC73Q6ZRK6 1079 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 LRRC8DQ7L1W4 858 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 LMBR1Q8WVP7 490 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 SEPT8Q92599 483 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 MTRQ99707 1265 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 ATP6V0A4Q9HBG4 840 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 PDLIM7Q9NR12 457 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 PCDHA2Q9Y5H9 948 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 CLIC4Q9Y696 253 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 H0YGN5 161 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 EML1O00423 815 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 CUTAO60888 179 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 EFCAB14O75071 495 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 PPP6R2O75170 966 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 SLITRK3O94933 977 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 CD4P01730 458 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 ZSCAN20P17040 1043 aaPredicted RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 FAM43BQ6ZT52 329 aaPredicted RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 DEFB128Q7Z7B8 93 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 USP38Q8NB14 1042 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 MCPH1Q8NEM0 835 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 PPP1R13LQ8WUF5 828 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 DNAJB3Q8WWF6 145 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 PSPC1Q8WXF1 523 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 BADQ92934 168 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 CCDC47Q96A33 483 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 NIFKQ9BYG3 293 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 GCOM2Q9BZD3 368 aaPredicted RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 ZNFX1Q9P2E3 1918 aaKnown RBP11.93□□□□□ -0.5
TPM1-229ENST00000561242 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
TPM1-229ENST00000561242 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 GPR182O15218 404 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 BRD1O95696 1058 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 CTSHP09668 335 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 CKBP12277 381 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 CYP2C18P33260 490 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 STAT6P42226 847 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 SMTNP53814 917 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 ZNF200P98182 395 aaPredicted RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 IKBKEQ14164 716 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 FAM102BQ5T8I3 360 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 PRPF38BQ5VTL8 546 aaKnown RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 CATSPER3Q86XQ3 398 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 PCYT2Q99447 389 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
TPM1-229ENST00000561242 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
TPM1-229ENST00000561242 PLXNA1Q9UIW2 1896 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 GRIN2DO15399 1336 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 LYPLA2O95372 231 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 IQCF3P0C7M6 154 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 PAK2Q13177 524 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 DHX8Q14562 1220 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 SV2BQ7L1I2 683 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 MAEAQ7L5Y9 396 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 RHPN2Q8IUC4 686 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 DEPTORQ8TB45 409 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 APBB2Q92870 758 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 NLRP4Q96MN2 994 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 PLIN2Q99541 437 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 HSD17B14Q9BPX1 270 aa11.91□□□□□ -0.5
TPM1-229ENST00000561242 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
TPM1-229ENST00000561242 TIPINQ9BVW5 301 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms