RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
SNX1-213ENST00000561026 NSUN3Q9H649 340 aaKnown RBP18.38■□□□□ 0.53
SNX1-213ENST00000561026 GINS2Q9Y248 185 aa18.38■□□□□ 0.53
SNX1-213ENST00000561026 CYP46A1Q9Y6A2 500 aa18.38■□□□□ 0.53
SNX1-213ENST00000561026 MYO7AQ13402 2215 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 GRM6O15303 877 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 C22orf31O95567 290 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 STAG3L1P0CL83 205 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 USP11P51784 963 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
SNX1-213ENST00000561026 COL19A1Q14993 1142 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 TRIM22Q8IYM9 498 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.37■□□□□ 0.53
SNX1-213ENST00000561026 NEK9Q8TD19 979 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 PLVAPQ9BX97 442 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 LMAN2LQ9H0V9 348 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
SNX1-213ENST00000561026 RALGAPA2Q2PPJ7 1873 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 NLRC5Q86WI3 1866 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 NLRP5P59047 1200 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 TRMT1LQ7Z2T5 733 aaKnown RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 CMTR2Q8IYT2 770 aaKnown RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 TMEM40Q8WWA1 233 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 PABPC5Q96DU9 382 aaKnown RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 ZNF274Q96GC6 653 aaPredicted RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 ERVK-5Q9HDB9 667 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 GABBR1Q9UBS5 961 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 NOC2LQ9Y3T9 749 aaKnown RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 SAMM50Q9Y512 469 aa18.36■□□□□ 0.53
SNX1-213ENST00000561026 MRPL42Q9Y6G3 142 aaKnown RBP18.36■□□□□ 0.53
SNX1-213ENST00000561026 MSH4O15457 936 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 RPS6KA5O75582 802 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 COL9A1P20849 921 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 SSRP1Q08945 709 aaKnown RBP18.35■□□□□ 0.53
SNX1-213ENST00000561026 RIT2Q99578 217 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
SNX1-213ENST00000561026 C1QTNF1Q9BXJ1 281 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 CEP131Q9UPN4 1083 aa18.35■□□□□ 0.53
SNX1-213ENST00000561026 WDR64B1ANS9 1081 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
SNX1-213ENST00000561026 CPLX1O14810 134 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 GPR182O15218 404 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 NCK2O43639 380 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 CRYBB1P53674 252 aaPredicted RBP18.34■□□□□ 0.53
SNX1-213ENST00000561026 KIZQ2M2Z5 673 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 PUS10Q3MIT2 529 aaKnown RBP18.34■□□□□ 0.53
SNX1-213ENST00000561026 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 PTCRAQ6ISU1 281 aaPredicted RBP18.34■□□□□ 0.53
SNX1-213ENST00000561026 METTL13Q8N6R0 699 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
SNX1-213ENST00000561026 CD320Q9NPF0 282 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 DISC1Q9NRI5 854 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 PCDHA4Q9UN74 947 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 ST3GAL5Q9UNP4 418 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 PLAGL2Q9UPG8 496 aa18.34■□□□□ 0.53
SNX1-213ENST00000561026 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 MAGEB2O15479 319 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 MGEA5O60502 916 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 GPR32O75388 356 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 DEXIO95424 95 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 MMP1P03956 469 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 VTNP04004 478 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.53
SNX1-213ENST00000561026 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 TBCKQ8TEA7 893 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 SLC5A5Q92911 643 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 P2RX5Q93086 422 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 PPP1R16BQ96T49 567 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 ADAM2Q99965 735 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 ALG13Q9NP73 1137 aaKnown RBP18.33■□□□□ 0.53
SNX1-213ENST00000561026 RGS18Q9NS28 235 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 C1orf112Q9NSG2 853 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 PCDHB7Q9Y5E2 793 aa18.33■□□□□ 0.53
SNX1-213ENST00000561026 LOXHD1Q8IVV2 1947 aa18.33■□□□□ 0.52
SNX1-213ENST00000561026 DENND3A2RUS2 1198 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 ZNF862O60290 1169 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 GAS7O60861 476 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 IL9P15248 144 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 CAMK1Q14012 370 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
SNX1-213ENST00000561026 EP400NLQ6ZTU2 488 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 SLC24A5Q71RS6 500 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 OSMRQ99650 979 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 CLDND1Q9NY35 253 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 MYH9P35579 1960 aaKnown RBP18.32■□□□□ 0.52
SNX1-213ENST00000561026 EVPLQ92817 2033 aa18.32■□□□□ 0.52
SNX1-213ENST00000561026 C9IYK1 514 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 M0R2N6 131 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 OATP04181 439 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 SFNP31947 248 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 GATMP50440 423 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 HYAL1Q12794 435 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms