RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SQORQ9Y6N5 450 aa12.21□□□□□ -0.45
TPM1-227ENST00000560970 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 MAFGO15525 162 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 CTDNEP1O95476 244 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 CD52P31358 61 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 LTBRP36941 435 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 CLK2P49760 499 aaKnown RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 TNPO1Q92973 898 aaKnown RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 PPP2R3CQ969Q6 453 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 PCYT2Q99447 389 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 SLKQ9H2G2 1235 aaPredicted RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 AGO3Q9H9G7 860 aaKnown RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 RIC8AQ9NPQ8 531 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
TPM1-227ENST00000560970 PIEZO1Q92508 2521 aa12.2□□□□□ -0.46
TPM1-227ENST00000560970 KDM3AQ9Y4C1 1321 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 SMCO2A6NFE2 343 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ENPP3O14638 875 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 MBTPS2O43462 519 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 INSRRP14616 1297 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ADCY7P51828 1080 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ACTR2P61160 394 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ANKRD1Q15327 319 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 CLUL1Q15846 466 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 MXRA8Q9BRK3 442 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 ANO3Q9BYT9 981 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 KCNH7Q9NS40 1196 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 TMEM260Q9NX78 707 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 TECTAO75443 2155 aa12.19□□□□□ -0.46
TPM1-227ENST00000560970 COL1A2P08123 1366 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 ESYT2A0FGR8 921 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 CPLX1O14810 134 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 IRS1P35568 1242 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 NDUFV1P49821 464 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 SLC26A2P50443 739 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
TPM1-227ENST00000560970 DLX2Q07687 328 aaPredicted RBP12.18□□□□□ -0.46
TPM1-227ENST00000560970 SSRP1Q08945 709 aaKnown RBP12.18□□□□□ -0.46
TPM1-227ENST00000560970 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 AP3B2Q13367 1082 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 PLCB4Q15147 1175 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 PAN2Q504Q3 1202 aaKnown RBP12.18□□□□□ -0.46
TPM1-227ENST00000560970 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 RASGRP4Q8TDF6 673 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 ZMYND12Q9H0C1 365 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
TPM1-227ENST00000560970 CD207Q9UJ71 328 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 PCDHA2Q9Y5H9 948 aa12.18□□□□□ -0.46
TPM1-227ENST00000560970 STK36Q9NRP7 1315 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 LINC01565O15544 149 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 DEXIO95424 95 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM1-227ENST00000560970 SREBF1P36956 1147 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 STAT5BP51692 787 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 KRT76Q01546 638 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 ITGB3BPQ13352 177 aaPredicted RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 CRIPAKQ8N1N5 446 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 NSUN7Q8NE18 718 aaKnown RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 BACH2Q9BYV9 841 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 AGO4Q9HCK5 861 aaKnown RBP12.17□□□□□ -0.46
TPM1-227ENST00000560970 PADI3Q9ULW8 664 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
TPM1-227ENST00000560970 JAK2O60674 1132 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 ITGB1P05556 798 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 FDPSP14324 419 aaKnown RBP12.16□□□□□ -0.46
TPM1-227ENST00000560970 DNAJB1P25685 340 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
TPM1-227ENST00000560970 CAMK1Q14012 370 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 NPY5RQ15761 445 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 HERC4Q5GLZ8 1057 aaPredicted RBP12.16□□□□□ -0.46
TPM1-227ENST00000560970 JAKMIP3Q5VZ66 844 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
TPM1-227ENST00000560970 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
TPM1-227ENST00000560970 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 ADGRD2Q7Z7M1 963 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 EFHBQ8N7U6 833 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms