RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 TLR2O60603 784 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 FARP2O94887 1054 aaPredicted RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 PRPF6O94906 941 aaKnown RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 SUPT20HL2P0C7V6 817 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 SFPQP23246 707 aaKnown RBP eCLIP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 GUCY2CP25092 1073 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 TBX2Q13207 712 aaPredicted RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 UTP14CQ5TAP6 766 aaKnown RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 MIS18BP1Q6P0N0 1132 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 ARMCX2Q7L311 632 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 CCDC43Q96MW1 224 aaKnown RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 PARVGQ9HBI0 331 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 DDX41Q9UJV9 622 aaKnown RBP19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 WDR81Q562E7 1941 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 SYNGAP1Q96PV0 1343 aa19.7■□□□□ 0.74
USP3-AS1-208ENST00000560962 PES1O00541 588 aaKnown RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 KIF20AO95235 890 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 GCNT3O95395 438 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 PBX1P40424 430 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 MTIF2P46199 727 aaKnown RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 TM4SF4P48230 202 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZCWPW2Q504Y3 356 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 SWSAP1Q6NVH7 229 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 C17orf99Q6UX52 265 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 EPM2AIP1Q7L775 607 aaPredicted RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 KIAA1524Q8TCG1 905 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 KCTD10Q9H3F6 313 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 ODF2LQ9ULJ1 636 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 SLC15A5A6NIM6 579 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 BACH1O14867 736 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 HIP1RO75146 1068 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 ARIH2O95376 493 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 FGFR1OPO95684 399 aaKnown RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 SKILP12757 684 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 NMT1P30419 496 aaKnown RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 CLCN1P35523 988 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 CCZ1BP86790 482 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 CCZ1P86791 482 aaPredicted RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 PLA2G4FQ68DD2 849 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 CCDC62Q6P9F0 684 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 FOXR2Q6PJQ5 311 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 METTL7BQ6UX53 244 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 MAMDC4Q6UXC1 1216 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 CCDC60Q8IWA6 550 aaPredicted RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 FBXO16Q8IX29 292 aaPredicted RBP19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 TUBGCP2Q9BSJ2 902 aa19.69■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZNF236Q9UL36 1845 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 MYH11P35749 1972 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 IGKV6D-21A0A0A0MT36 114 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 NKRFO15226 690 aaKnown RBP eCLIP19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZNF862O60290 1169 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 USO1O60763 962 aaKnown RBP19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 STBD1O95210 358 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 GGPS1O95749 300 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZNF131P52739 623 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 NPEPPSP55786 919 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 UBXN1Q04323 297 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 LY6KQ17RY6 165 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 XKR9Q5GH70 373 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 LRRC55Q6ZSA7 311 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 DPP9Q86TI2 863 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZFYVE28Q9HCC9 887 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 OLFML3Q9NRN5 406 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 PLXNA1Q9UIW2 1896 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 IGSF9BQ9UPX0 1349 aa19.68■□□□□ 0.74
USP3-AS1-208ENST00000560962 HOXD13P35453 343 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 MAPK7Q13164 816 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 ANO5Q75V66 913 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 DAW1Q8N136 415 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 MAFBQ9Y5Q3 323 aaPredicted RBP19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 LGALS16A8MUM7 142 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 FKBP3Q00688 224 aaKnown RBP19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 KNOP1Q1ED39 458 aaKnown RBP19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 ODR4Q5SWX8 454 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 CEP135Q66GS9 1140 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 OTUD6AQ7L8S5 288 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZNF507Q8TCN5 953 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 MAML3Q96JK9 1138 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 TIPINQ9BVW5 301 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 MLXIPQ9HAP2 919 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 VTA1Q9NP79 307 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 SEL1LQ9UBV2 794 aa19.67■□□□□ 0.74
USP3-AS1-208ENST00000560962 GSTTP1A0A1W2PQM5 241 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 TPM2P07951 284 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 ADKP55263 362 aaKnown RBP19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 KCNA1Q09470 495 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 TTLL4Q14679 1199 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 ZC2HC1CQ53FD0 456 aaPredicted RBP19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 CELF3Q5SZQ8 465 aaKnown RBP19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 MORN1Q5T089 497 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 SCFD2Q8WU76 684 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 CPLX3Q8WVH0 158 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 NOC4LQ9BVI4 516 aaKnown RBP19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 MCM3APO60318 1980 aa19.66■□□□□ 0.74
USP3-AS1-208ENST00000560962 RBM47A0AV96 593 aaKnown RBP19.65■□□□□ 0.74
USP3-AS1-208ENST00000560962 PRKCEQ02156 737 aa19.65■□□□□ 0.74
USP3-AS1-208ENST00000560962 RBL2Q08999 1139 aa19.65■□□□□ 0.74
USP3-AS1-208ENST00000560962 NOLC1Q14978 699 aaKnown RBP eCLIP19.65■□□□□ 0.74
USP3-AS1-208ENST00000560962 BMT2Q1RMZ1 405 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms