RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 CLCN6P51797 869 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 AK2P54819 239 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 NLRP5P59047 1200 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 SSRP1Q08945 709 aaKnown RBP12.68□□□□□ -0.38
GABPB1-210ENST00000560825 DRP2Q13474 957 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 SKIV2LQ15477 1246 aaKnown RBP12.68□□□□□ -0.38
GABPB1-210ENST00000560825 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
GABPB1-210ENST00000560825 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 YME1L1Q96TA2 773 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
GABPB1-210ENST00000560825 PCDHA4Q9UN74 947 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 TRPV2Q9Y5S1 764 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 WNT7AO00755 349 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 STBD1O95210 358 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 NEFLP07196 543 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 IBSPP21815 317 aaPredicted RBP12.67□□□□□ -0.38
GABPB1-210ENST00000560825 GNA11P29992 359 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 CLCN3P51790 818 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 MRPS5P82675 430 aaKnown RBP12.67□□□□□ -0.38
GABPB1-210ENST00000560825 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.382e-9■□□□□ 9.6
GABPB1-210ENST00000560825 ZNF689Q96CS4 500 aaPredicted RBP12.67□□□□□ -0.38
GABPB1-210ENST00000560825 GLT8D2Q9H1C3 349 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 GINS2Q9Y248 185 aa12.67□□□□□ -0.38
GABPB1-210ENST00000560825 EPB41L2O43491 1005 aaKnown RBP12.66□□□□□ -0.38
GABPB1-210ENST00000560825 PFKFB2O60825 505 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 GPR32O75388 356 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 PSMD10O75832 226 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 DGKIO75912 1065 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 DEXIO95424 95 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 DNAJB1P25685 340 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 KRT76Q01546 638 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
GABPB1-210ENST00000560825 CAMK1Q14012 370 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 ME3Q16798 604 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 INF2Q27J81 1249 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF746Q6NUN9 644 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-210ENST00000560825 MIS18BP1Q6P0N0 1132 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 TMEM192Q8IY95 271 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 LRRC71Q8N4P6 559 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 LINC01465Q8N7H1 131 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 ETNPPLQ8TBG4 499 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-210ENST00000560825 APBB2Q92870 758 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 OSMRQ99650 979 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
GABPB1-210ENST00000560825 EML1O00423 815 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 GRM6O15303 877 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 HBP1O60381 514 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 FOSBP53539 338 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 PAN2Q504Q3 1202 aaKnown RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 DAGLBQ8NCG7 672 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 MBOAT7Q96N66 472 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 ERVK-5Q9HDB9 667 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 CD320Q9NPF0 282 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 PCDHGC5Q9Y5F6 944 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 MRPL42Q9Y6G3 142 aaKnown RBP12.65□□□□□ -0.38
GABPB1-210ENST00000560825 ADGRA3Q8IWK6 1321 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 KDM3AQ9Y4C1 1321 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 WDFY4Q6ZS81 3184 aa12.65□□□□□ -0.38
GABPB1-210ENST00000560825 CYP3A7-CYP3A51PA0A087WV96 503 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 H3BNC9 293 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 CPLX1O14810 134 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 JAK2O60674 1132 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 FGFR4P22455 802 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 CYP3A7P24462 503 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 USP11P51784 963 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 PRKCEQ02156 737 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 NR5A1Q13285 461 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 GPM6BQ13491 265 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 IER5Q5VY09 327 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 IL17RAQ96F46 866 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
GABPB1-210ENST00000560825 RAPGEFL1Q9UHV5 662 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 SAMM50Q9Y512 469 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms