RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, human

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHF-208	ENST00000560734	TUBB2A	Q13885	445 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	ARHGAP29	Q52LW3	1261 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	SLC17A8	Q8NDX2	589 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	DNER	Q8NFT8	737 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	TUBB2B	Q9BVA1	445 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	MMRN2	Q9H8L6	949 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734	CEP72	Q9P209	647 aa		27.61	■■■□□ 2.01
SHF-208	ENST00000560734		A0A0G2JMZ2	1700 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	RARRES1	P49788	294 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	MAPK7	Q13164	816 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	LBX2	Q6XYB7	198 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	PDCL2	Q8N4E4	241 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	CCDC94	Q9BW85	323 aa	Predicted RBP	27.6	■■■□□ 2.01
SHF-208	ENST00000560734	HAUS4	Q9H6D7	363 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	A1CF	Q9NQ94	594 aa	Known RBP	27.6	■■■□□ 2.01
SHF-208	ENST00000560734	LARS	Q9P2J5	1176 aa	Known RBP	27.6	■■■□□ 2.01
SHF-208	ENST00000560734	SAMM50	Q9Y512	469 aa		27.6	■■■□□ 2.01
SHF-208	ENST00000560734	CXCL11	O14625	94 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	TGFB1I1	O43294	461 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	PPP1R37	O75864	691 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	DPY19L2	Q6NUT2	758 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.59	■■■□□ 2.01
SHF-208	ENST00000560734	ST6GALNAC4	Q9H4F1	302 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	CGN	Q9P2M7	1197 aa	Known RBP	27.59	■■■□□ 2.01
SHF-208	ENST00000560734	PTPRF	P10586	1907 aa		27.59	■■■□□ 2.01
SHF-208	ENST00000560734	TESPA1	A2RU30	521 aa	Predicted RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ATP9A	O75110	1047 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	EPB41	P11171	864 aa	Known RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	GNPTAB	Q3T906	1256 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ODR4	Q5SWX8	454 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ACRBP	Q8NEB7	543 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	BAP1	Q92560	729 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	FAM207A	Q9NSI2	230 aa	Predicted RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	PKD2L1	Q9P0L9	805 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	PFAS	O15067	1338 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ZMYM2	Q9UBW7	1377 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	HIP1R	O75146	1068 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	IPO7	O95373	1038 aa	Known RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	YWHAB	P31946	246 aa	Known RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	NF2	P35240	595 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ARHGAP25	P42331	645 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	SNRPF	P62306	86 aa	Known RBP	27.58	■■■□□ 2.01
SHF-208	ENST00000560734	C9orf131	Q5VYM1	1079 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	HS2ST1	Q7LGA3	356 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	ERO1B	Q86YB8	467 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	RIOX2	Q8IUF8	465 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	SLC9A9	Q8IVB4	645 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	DAW1	Q8N136	415 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	WDR24	Q96S15	920 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	LZTFL1	Q9NQ48	299 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	PCDHA10	Q9Y5I2	948 aa		27.58	■■■□□ 2.01
SHF-208	ENST00000560734	OTOF	Q9HC10	1997 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734		A0A0G2JLL6	359 aa	Predicted RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	GTPBP10	A4D1E9	387 aa	Known RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	FANCG	O15287	622 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734	CCNE2	O96020	404 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734	NMT1	P30419	496 aa	Known RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	KCNH2	Q12809	1159 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	ANKRD13A	Q8IZ07	590 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734	PLCB1	Q9NQ66	1216 aa		27.57	■■■□□ 2
SHF-208	ENST00000560734	ZNF215	Q9UL58	517 aa	Predicted RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	REXO2	Q9Y3B8	237 aa	Known RBP	27.57	■■■□□ 2
SHF-208	ENST00000560734	SFI1	A8K8P3	1242 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	ADM5	C9JUS6	153 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	LCA5L	O95447	670 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	AFP	P02771	609 aa	Known RBP	27.56	■■■□□ 2
SHF-208	ENST00000560734	XRCC5	P13010	732 aa	Known RBP	27.56	■■■□□ 2
SHF-208	ENST00000560734	PDXDC1	Q6P996	788 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	DRC1	Q96MC2	740 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	GBP3	Q9H0R5	595 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	DMAC2	Q9NW81	257 aa		27.56	■■■□□ 2
SHF-208	ENST00000560734	SPATA31C2	B4DYI2	1134 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	IRF6	O14896	467 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	AKAP3	O75969	853 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	KCNA2	P16389	499 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	ICAM3	P32942	547 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	BORCS6	Q96GS4	357 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	TMEM206	Q9H813	350 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	SSU72P8	A0A1W2PR75	194 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	DCAF8L1	A6NGE4	600 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	EPHB6	O15197	1021 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	PLS3	P13797	630 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	YBX3	P16989	372 aa	Known RBP eCLIP	27.55	■■■□□ 2
SHF-208	ENST00000560734	PSMC2	P35998	433 aa	Known RBP	27.55	■■■□□ 2
SHF-208	ENST00000560734	PRKG1	Q13976	671 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	27.55	■■■□□ 2
SHF-208	ENST00000560734	CACNA2D4	Q7Z3S7	1137 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	EHBP1	Q8NDI1	1231 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	CCDC42	Q96M95	316 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	FBXL5	Q9UKA1	691 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	MYO6	Q9UM54	1294 aa		27.55	■■■□□ 2
SHF-208	ENST00000560734	SPDYE5	A6NIY4	337 aa		27.54	■■■□□ 2
SHF-208	ENST00000560734	NOL4	O94818	638 aa		27.54	■■■□□ 2
SHF-208	ENST00000560734	MAPK8IP2	Q13387	824 aa	Predicted RBP	27.54	■■■□□ 2
SHF-208	ENST00000560734	OTUD6A	Q7L8S5	288 aa		27.54	■■■□□ 2
SHF-208	ENST00000560734	C12orf56	Q8IXR9	622 aa		27.54	■■■□□ 2
SHF-208	ENST00000560734	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms