RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	PHF19	Q5T6S3	580 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	CYP4F22	Q6NT55	531 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	SLC43A3	Q8NBI5	491 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	NUDT10	Q8NFP7	164 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559		Q8TCH9	128 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	NUDT11	Q96G61	164 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	WWC2-AS2	Q96NR7	200 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	JAM3	Q9BX67	310 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	TGIF2	Q9GZN2	237 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	DLL4	Q9NR61	685 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
BLM-209	ENST00000560559	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.71	□□□□□ -1.5
BLM-209	ENST00000560559	TESMIN	Q9Y4I5	508 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	PCNT	O95613	3336 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	KDM5A	P29375	1690 aa	Known RBP	5.71	□□□□□ -1.5
BLM-209	ENST00000560559	MYO5C	Q9NQX4	1742 aa		5.71	□□□□□ -1.5
BLM-209	ENST00000560559	CTTNBP2	Q8WZ74	1663 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	AGRP	O00253	132 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	SLC27A2	O14975	620 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	KCNA6	P17658	529 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	SMAD2	Q15796	467 aa	Known RBP	5.7	□□□□□ -1.5
BLM-209	ENST00000560559	DENND5A	Q6IQ26	1287 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	GIMAP6	Q6P9H5	292 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559		Q6ZUG5	572 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	IFNL2	Q8IZJ0	200 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.7	□□□□□ -1.5
BLM-209	ENST00000560559	PIP4K2C	Q8TBX8	421 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	KCTD13	Q8WZ19	329 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	PCED1A	Q9H1Q7	454 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	MEGF9	Q9H1U4	602 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	SLC6A20	Q9NP91	592 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	HSPBP1	Q9NZL4	362 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	SETD5	Q9C0A6	1442 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	PZP	P20742	1482 aa		5.7	□□□□□ -1.5
BLM-209	ENST00000560559	NKTR	P30414	1462 aa	Known RBP	5.7	□□□□□ -1.5
BLM-209	ENST00000560559	PNPLA6	Q8IY17	1366 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	SHANK3	Q9BYB0	1731 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	MIA2	Q96PC5	1412 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	KCNQ2	O43526	872 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	KLHL18	O94889	574 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	ATF4	P18848	351 aa	Predicted RBP	5.69	□□□□□ -1.5
BLM-209	ENST00000560559	ATP2B1	P20020	1258 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	GLRB	P48167	497 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	FXN	Q16595	210 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	VPS37D	Q86XT2	251 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	DTX3	Q8N9I9	347 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	GNRHR2	Q96P88	292 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	LRRC37B	Q96QE4	947 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	LMF1	Q96S06	567 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	SEC61A2	Q9H9S3	476 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	CAPN10	Q9HC96	672 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	NUB1	Q9Y5A7	615 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	CAMSAP2	Q08AD1	1489 aa		5.69	□□□□□ -1.5
BLM-209	ENST00000560559	SPHKAP	Q2M3C7	1700 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	MAST1	Q9Y2H9	1570 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	FAM83G	A6ND36	823 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	CNOT4	O95628	575 aa	Known RBP	5.68	□□□□□ -1.5
BLM-209	ENST00000560559	CHGB	P05060	677 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	CKM	P06732	381 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	COL6A1	P12109	1028 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	KLF10	Q13118	480 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	PRKD1	Q15139	912 aa	Predicted RBP	5.68	□□□□□ -1.5
BLM-209	ENST00000560559	ZNF568	Q3ZCX4	644 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	CRB2	Q5IJ48	1285 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	SLC35F1	Q5T1Q4	408 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	SOGA3	Q5TF21	947 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	EEPD1	Q7L9B9	569 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	TTLL11	Q8NHH1	800 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	IPO4	Q8TEX9	1081 aa	Known RBP	5.68	□□□□□ -1.5
BLM-209	ENST00000560559	CLEC4D	Q8WXI8	215 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	C1orf159	Q96HA4	380 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	ARHGAP20	Q9P2F6	1191 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	ZFP69B	Q9UJL9	534 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	NPFFR2	Q9Y5X5	522 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	A2M	P01023	1474 aa		5.68	□□□□□ -1.5
BLM-209	ENST00000560559	AATK	Q6ZMQ8	1374 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	BRWD3	Q6RI45	1802 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	GOLGB1	Q14789	3259 aa	Known RBP	5.67	□□□□□ -1.5
BLM-209	ENST00000560559	NCOA2	Q15596	1464 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	SKIDA1	Q1XH10	827 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	USP53	Q70EK8	1073 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	GPR155	Q7Z3F1	870 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	PROSER1	Q86XN7	944 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	RBM12B	Q8IXT5	1001 aa	Known RBP	5.67	□□□□□ -1.5
BLM-209	ENST00000560559	DNAJC5G	Q8N7S2	189 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	LRRC59	Q96AG4	307 aa	Known RBP	5.67	□□□□□ -1.5
BLM-209	ENST00000560559	TINF2	Q9BSI4	451 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	GPR27	Q9NS67	375 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	PLXNC1	O60486	1568 aa		5.67	□□□□□ -1.5
BLM-209	ENST00000560559	TLDC2	A0PJX2	215 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	FOXS1	O43638	330 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	KNG1	P01042	644 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	ENO2	P09104	434 aa	Predicted RBP	5.66	□□□□□ -1.5
BLM-209	ENST00000560559	FAH	P16930	419 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	GRIA2	P42262	883 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	PPP2R2A	P63151	447 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	IRX6	P78412	446 aa	Predicted RBP	5.66	□□□□□ -1.5
BLM-209	ENST00000560559	SPIRE1	Q08AE8	756 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	MAP4K2	Q12851	820 aa		5.66	□□□□□ -1.5
BLM-209	ENST00000560559	TUSC3	Q13454	348 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms