RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 B3GNT8Q7Z7M8 397 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 DCP2Q8IU60 420 aaKnown RBP5.57□□□□□ -1.52
TMOD3-207ENST00000560549 RIOX2Q8IUF8 465 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 TRMT2AQ8IZ69 625 aaKnown RBP5.57□□□□□ -1.52
TMOD3-207ENST00000560549 ZBTB38Q8NAP3 1195 aaPredicted RBP5.57□□□□□ -1.52
TMOD3-207ENST00000560549 EXOC6Q8TAG9 804 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 CXorf38Q8TB03 319 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 FEZF2Q8TBJ5 459 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 CPA5Q8WXQ8 436 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 DDX11Q96FC9 970 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 CCDC140Q96MF4 163 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 PSMD1Q99460 953 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 AARSD1Q9BTE6 412 aaKnown RBP5.57□□□□□ -1.52
TMOD3-207ENST00000560549 NUDT5Q9UKK9 219 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 A0A1W2PP64 1363 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 ABCC11Q96J66 1382 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 FYB1O15117 783 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SASH1O94885 1247 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SLC6A11P48066 632 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 CACNB2Q08289 660 aaPredicted RBP5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SLFN5Q08AF3 891 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SAPCD2Q86UD0 394 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 MIB1Q86YT6 1006 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.56□□□□□ -1.52
TMOD3-207ENST00000560549 KCTD13Q8WZ19 329 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 KISS1RQ969F8 398 aaPredicted RBP5.56□□□□□ -1.52
TMOD3-207ENST00000560549 TRMT2BQ96GJ1 504 aaKnown RBP5.56□□□□□ -1.52
TMOD3-207ENST00000560549 TMEM169Q96HH4 297 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SGSM3Q96HU1 749 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 PMF1-BGLAPU3KQ54 211 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 CGNL1Q0VF96 1302 aa5.56□□□□□ -1.52
TMOD3-207ENST00000560549 SH3D21A4FU49 640 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 AGRPO00253 132 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 PPP1R12AO14974 1030 aaPredicted RBP5.55□□□□□ -1.52
TMOD3-207ENST00000560549 PRODHO43272 600 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
TMOD3-207ENST00000560549 CDC45O75419 566 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 ZBTB7AO95365 584 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
TMOD3-207ENST00000560549 NFIXQ14938 502 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 SLC9A5Q14940 896 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 C20orf194Q5TEA3 1177 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 MROH9Q5TGP6 573 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 USP53Q70EK8 1073 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 SEC14L1Q92503 715 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 GORASP1Q9BQQ3 440 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 SPATA6Q9NWH7 488 aaPredicted RBP5.55□□□□□ -1.52
TMOD3-207ENST00000560549 KLHL42Q9P2K6 505 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 NOP58Q9Y2X3 529 aaKnown RBP5.55□□□□□ -1.52
TMOD3-207ENST00000560549 NRXN3Q9Y4C0 1643 aa5.55□□□□□ -1.52
TMOD3-207ENST00000560549 DLC1Q96QB1 1528 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 FGFR1P11362 822 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 PABPC1P11940 636 aaKnown RBP5.54□□□□□ -1.52
TMOD3-207ENST00000560549 LSAMPQ13449 338 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 HSP90AA2PQ14568 343 aaPredicted RBP5.54□□□□□ -1.52
TMOD3-207ENST00000560549 FAM209AQ5JX71 171 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 LIPIQ6XZB0 460 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 MILR1Q7Z6M3 343 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 STK32CQ86UX6 486 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 LRRC47Q8N1G4 583 aaKnown RBP5.54□□□□□ -1.52
TMOD3-207ENST00000560549 ARRDC4Q8NCT1 418 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 UBE2Q2Q8WVN8 375 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 TEPSINQ96N21 525 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 PHF20Q9BVI0 1012 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 CLDND1Q9NY35 253 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 WASF3Q9UPY6 502 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 RRP7AQ9Y3A4 280 aaKnown RBP5.54□□□□□ -1.52
TMOD3-207ENST00000560549 SETD1AO15047 1707 aaKnown RBP5.54□□□□□ -1.52
TMOD3-207ENST00000560549 PLEKHG1Q9ULL1 1385 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 ADAMTS13Q76LX8 1427 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 CPS1P31327 1500 aa5.54□□□□□ -1.52
TMOD3-207ENST00000560549 H7BY64 318 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 PARNO95453 639 aaKnown RBP5.53□□□□□ -1.52
TMOD3-207ENST00000560549 STAT5AP42229 794 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 GTF2A2P52657 109 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 SLURP1P55000 103 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 SMAD4Q13485 552 aaKnown RBP5.53□□□□□ -1.52
TMOD3-207ENST00000560549 LONRF2Q1L5Z9 754 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 ETV3LQ6ZN32 361 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 FRMD5Q7Z6J6 570 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 ZDHHC14Q8IZN3 488 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMOD3-207ENST00000560549 APPBP2Q92624 585 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 CHAMP1Q96JM3 812 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 JAM3Q9BX67 310 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 AP5M1Q9H0R1 490 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 ADAM7Q9H2U9 754 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 GPR27Q9NS67 375 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 TERF2IPQ9NYB0 399 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 NINLQ9Y2I6 1382 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 PTPRUQ92729 1446 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 DIP2AQ14689 1571 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 USP32Q8NFA0 1604 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 STRCP1A6NGW2 1772 aa5.53□□□□□ -1.52
TMOD3-207ENST00000560549 TCRBV5S2A0A599 114 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms