RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PADI3Q9ULW8 664 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 HCN4Q9Y3Q4 1203 aa15.39■□□□□ 0.05
SMAD3-214ENST00000560402 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 FAM86B1E9PN63 330 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 IPO5O00410 1097 aaKnown RBP15.38■□□□□ 0.05
SMAD3-214ENST00000560402 GPR37L1O60883 481 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 CCNE2O96020 404 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 FAM86B2P0C5J1 330 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 PLA2G5P39877 138 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 JAKMIP3Q5VZ66 844 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 ZNF746Q6NUN9 644 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-214ENST00000560402 PDXDC2PQ6P474 469 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 CCDC60Q8IWA6 550 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-214ENST00000560402 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-214ENST00000560402 CRIPAKQ8N1N5 446 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 BICD2Q8TD16 824 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 ZBTB10Q96DT7 871 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 LRFN3Q9BTN0 628 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 CLDND1Q9NY35 253 aa15.38■□□□□ 0.05
SMAD3-214ENST00000560402 PLXNA4Q9HCM2 1894 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 H3BQ06 376 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 GRM6O15303 877 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 KLRC1P26715 233 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 SSTR3P32745 418 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 HSPA4P34932 840 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 ADD1P35611 737 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 SARSP49591 514 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 MCM2P49736 904 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 AKAP17AQ02040 695 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 Q6ZUG5 572 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 BRF1Q92994 677 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 JAKMIP1Q96N16 626 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 ZNF577Q9BSK1 485 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 RNF26Q9BY78 433 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 AGXT2Q9BYV1 514 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 C1orf112Q9NSG2 853 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 CEP131Q9UPN4 1083 aa15.37■□□□□ 0.05
SMAD3-214ENST00000560402 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
SMAD3-214ENST00000560402 K7ELQ4 463 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 PRPF3O43395 683 aaKnown RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 ALADP13716 330 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 TMEM62Q0P6H9 643 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 APOBRQ0VD83 1088 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 EP400NLQ6ZTU2 488 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 RTN4RL1Q86UN2 441 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 FAM167AQ96KS9 214 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 POP1Q99575 1024 aaKnown RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 ERVK-5Q9HDB9 667 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 CD320Q9NPF0 282 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
SMAD3-214ENST00000560402 MAFBQ9Y5Q3 323 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-214ENST00000560402 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 GPR182O15218 404 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 PSAPP07602 524 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 PSMA5P28066 241 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 CIITAP33076 1130 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 HYAL1Q12794 435 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 PKN1Q16512 942 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 KHSRPQ92945 711 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMAD3-214ENST00000560402 FAM122AQ96E09 287 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 RAPGEFL1Q9UHV5 662 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
SMAD3-214ENST00000560402 DENND3A2RUS2 1198 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 PRR33A8MZF0 331 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 WDR64B1ANS9 1081 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 ZBTB42B2RXF5 422 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 C22orf31O95567 290 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 CRYBB1P53674 252 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-214ENST00000560402 UBE3AQ05086 875 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 ZP2Q05996 745 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 NFX1Q12986 1120 aaKnown RBP15.34■□□□□ 0.05
SMAD3-214ENST00000560402 CSPP1Q1MSJ5 1256 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 ADHFE1Q8IWW8 467 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 KIAA0319LQ8IZA0 1049 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 C11orf16Q9NQ32 467 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 AAASQ9NRG9 546 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 PCDHA10Q9Y5I2 948 aa15.34■□□□□ 0.05
SMAD3-214ENST00000560402 MAGEB2O15479 319 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 ITGB1P05556 798 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 IFNAR1P17181 557 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 LTBRP36941 435 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 SMAD4Q13485 552 aaKnown RBP15.33■□□□□ 0.04
SMAD3-214ENST00000560402 SMAD2Q15796 467 aaKnown RBP15.33■□□□□ 0.04
SMAD3-214ENST00000560402 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
SMAD3-214ENST00000560402 PRR16Q569H4 304 aa15.33■□□□□ 0.04
SMAD3-214ENST00000560402 SLC24A5Q71RS6 500 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms