RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 MRPL43Q8N983 215 aaKnown RBP11.93□□□□□ -0.5
APH1B-208ENST00000560353 SUMF1Q8NBK3 374 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
APH1B-208ENST00000560353 BORCS6Q96GS4 357 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 TYW1Q9NV66 732 aaKnown RBP11.93□□□□□ -0.5
APH1B-208ENST00000560353 DUSP12Q9UNI6 340 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 HCFC2Q9Y5Z7 792 aa11.93□□□□□ -0.5
APH1B-208ENST00000560353 C2orf72A6NCS6 295 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 SPATA31C2B4DYI2 1134 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 M0QZ92 97 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 FOXP2O15409 715 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
APH1B-208ENST00000560353 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
APH1B-208ENST00000560353 ADRB1P08588 477 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 SP9P0CG40 484 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 LMNB2Q03252 620 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 GRIK4Q16099 956 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
APH1B-208ENST00000560353 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 OTOP3Q7RTS5 596 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 TMC7Q7Z402 723 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 DZANK1Q9NVP4 752 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 NCDNQ9UBB6 729 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 WNT16Q9UBV4 365 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
APH1B-208ENST00000560353 PCDHA1Q9Y5I3 950 aa11.92□□□□□ -0.5
APH1B-208ENST00000560353 FAM208BQ5VWN6 2430 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 OPLAHO14841 1288 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 KINO60870 393 aaKnown RBP11.91□□□□□ -0.5
APH1B-208ENST00000560353 STAM2O75886 525 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 IBSPP21815 317 aaPredicted RBP11.91□□□□□ -0.5
APH1B-208ENST00000560353 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
APH1B-208ENST00000560353 PPM1AP35813 382 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
APH1B-208ENST00000560353 ALX1Q15699 326 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 ASPRV1Q53RT3 343 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 C1orf210Q8IVY1 113 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 RTKNQ9BST9 563 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 FAM49AQ9H0Q0 323 aaPredicted RBP11.91□□□□□ -0.5
APH1B-208ENST00000560353 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 VAT1LQ9HCJ6 419 aa11.91□□□□□ -0.5
APH1B-208ENST00000560353 IGSF9BQ9UPX0 1349 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 GPR179Q6PRD1 2367 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 C2orf71A6NGG8 1288 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 FIBPO43427 364 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 CLASP2O75122 1294 aaKnown RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 PDE4AP27815 886 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 EMP3P54852 163 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 VARS2Q5ST30 1063 aaKnown RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 FAM102BQ5T8I3 360 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 C12orf76Q8N812 135 aaPredicted RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 GIMAP8Q8ND71 665 aaPredicted RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 INPP4AQ96PE3 977 aaPredicted RBP11.9□□□□□ -0.5
APH1B-208ENST00000560353 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 CWH43Q9H720 699 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 KCNK12Q9HB15 430 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 C1orf112Q9NSG2 853 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 ZBTB40Q9NUA8 1239 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 ERAP1Q9NZ08 941 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 IGSF9Q9P2J2 1179 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 TRPV2Q9Y5S1 764 aa11.9□□□□□ -0.5
APH1B-208ENST00000560353 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 RRN3P2A6NIE6 340 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
APH1B-208ENST00000560353 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
APH1B-208ENST00000560353 MS4A1P11836 297 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
APH1B-208ENST00000560353 SP4Q02446 784 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 ACAP1Q15027 740 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 SLC24A5Q71RS6 500 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 ZNF558Q96NG5 402 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 CELF4Q9BZC1 486 aaKnown RBP11.89□□□□□ -0.51
APH1B-208ENST00000560353 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 RGS18Q9NS28 235 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 SPG21Q9NZD8 308 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
APH1B-208ENST00000560353 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
APH1B-208ENST00000560353 KRBA1A5PL33 1030 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
APH1B-208ENST00000560353 TMEM62Q0P6H9 643 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
APH1B-208ENST00000560353 TRAF1Q13077 416 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 NONOQ15233 471 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms