RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 HAS1Q92839 578 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 COL1A2P08123 1366 aa13.14□□□□□ -0.31
RABGGTA-216ENST00000560243 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 EFCAB14O75071 495 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 STBD1O95210 358 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 OATP04181 439 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 GCFC2P16383 781 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 CD52P31358 61 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 SFNP31947 248 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 TRIM29Q14134 588 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 RABEP1Q15276 862 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 IER5Q5VY09 327 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 MAFAQ8NHW3 353 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 CELF4Q9BZC1 486 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 TRPV2Q9Y5S1 764 aa13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-216ENST00000560243 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 UPP2O95045 317 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 AMHP03971 560 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 VTNP04004 478 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 CLCN3P51790 818 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 METTL13Q8N6R0 699 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 USP38Q8NB14 1042 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 TMEM40Q8WWA1 233 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 LINC01599Q8WXQ3 324 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 FAM167AQ96KS9 214 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 RAD9AQ99638 391 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
RABGGTA-216ENST00000560243 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 PPP2R5CQ13362 524 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 TARBP2Q15633 366 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 KIZQ2M2Z5 673 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 NME8Q8N427 588 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 LINC01465Q8N7H1 131 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 APBB2Q92870 758 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 PADI3Q9ULW8 664 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 TTC3P53804 2025 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
RABGGTA-216ENST00000560243 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 M0QZ92 97 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 ENPP3O14638 875 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 TBX3O15119 743 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 ATP2B1P20020 1258 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 IGFBP4P22692 258 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 HTRA4P83105 476 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 DRP2Q13474 957 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 EFCAB12Q6NXP0 572 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 ANO5Q75V66 913 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 FBXO18Q8NFZ0 1043 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 TOP1MTQ969P6 601 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 ZNF668Q96K58 619 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 NAP1L4Q99733 375 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 CEP131Q9UPN4 1083 aa13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-216ENST00000560243 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 MAGEB2O15479 319 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 ST18O60284 1047 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 MARCH6O60337 910 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 GPR32O75388 356 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 PAK2Q13177 524 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 MTERF2Q49AM1 385 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 PLA2G4FQ68DD2 849 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 NCAPH2Q6IBW4 605 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms