RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 LGR5O75473 907 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 ZNF865P0CJ78 1059 aaPredicted RBP12.45□□□□□ -0.42
USP3-218ENST00000560202 ATP4AP20648 1035 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 PRCPP42785 496 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 NPEPPSP55786 919 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 CAP1Q01518 475 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 MYL5Q02045 173 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 PRKCZQ05513 592 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
USP3-218ENST00000560202 PLA2G4FQ68DD2 849 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 KIAA0895Q8NCT3 520 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 SH2D3AQ9BRG2 576 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 ZHX3Q9H4I2 956 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
USP3-218ENST00000560202 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 MCM3APO60318 1980 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 RSPH10B2B2RC85 870 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 GPR25O00155 361 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 OATP04181 439 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 RSPH10BP0C881 870 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 TNFAIP2Q03169 654 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 STIM1Q13586 685 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 NCAPHQ15003 741 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 COBLL1Q53SF7 1204 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 FAM26FQ5R3K3 315 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
USP3-218ENST00000560202 GLG1Q92896 1179 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 CEP170P1Q96L14 293 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 ODF2LQ9ULJ1 636 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 COL4A3BPQ9Y5P4 624 aa12.45□□□□□ -0.42
USP3-218ENST00000560202 DOCK5Q9H7D0 1870 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
USP3-218ENST00000560202 FAM13AO94988 1023 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 GAP43P17677 238 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 PPP1R2P41236 205 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 TRMT44Q8IYL2 757 aaKnown RBP12.44□□□□□ -0.42
USP3-218ENST00000560202 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 MED15Q96RN5 788 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 SAGE1Q9NXZ1 904 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 PCDHA2Q9Y5H9 948 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 EMSYQ7Z589 1322 aa12.44□□□□□ -0.42
USP3-218ENST00000560202 THSD7BQ9C0I4 1608 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 SFI1A8K8P3 1242 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 PSMA7O14818 248 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 ADCY6O43306 1168 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 HIP1RO75146 1068 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 OFD1O75665 1012 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 HOXD10P28358 340 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 ZNF131P52739 623 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 STX17P56962 302 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 PAK1Q13153 545 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 MAEAQ7L5Y9 396 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 SFR1Q86XK3 245 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 TRIM50Q86XT4 487 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 GUF1Q8N442 669 aaKnown RBP12.43□□□□□ -0.42
USP3-218ENST00000560202 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 NELFBQ8WX92 580 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 TRIB2Q92519 343 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 DHTKD1Q96HY7 919 aaPredicted RBP12.43□□□□□ -0.42
USP3-218ENST00000560202 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
USP3-218ENST00000560202 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 PARVGQ9HBI0 331 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 NRBP1Q9UHY1 535 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 RWDD2AQ9UIY3 292 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
USP3-218ENST00000560202 GNEQ9Y223 722 aaKnown RBP12.43□□□□□ -0.42
USP3-218ENST00000560202 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
USP3-218ENST00000560202 MGAMO43451 1857 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 PPFIA4O75335 1185 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 DGAT1O75907 488 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 SLC26A2P50443 739 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 TPM4P67936 248 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 MAPK7Q13164 816 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 LRRC41Q15345 812 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 DOCK3Q8IZD9 2030 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 DAW1Q8N136 415 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 OLFML3Q9NRN5 406 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
USP3-218ENST00000560202 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms