RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CD2BP2O95400 341 aaKnown RBP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 MYOGP15173 224 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 KCNJ6P48051 423 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 TRIM29Q14134 588 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 MIER3Q7Z3K6 550 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 TOP1MTQ969P6 601 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 IFIH1Q9BYX4 1025 aaKnown RBP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 CELF4Q9BZC1 486 aaKnown RBP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 FOXP1Q9H334 677 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-213ENST00000560175 SLC28A3Q9HAS3 691 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 NRBP2Q9NSY0 501 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 SAMM50Q9Y512 469 aa14.89□□□□□ -0.03
SMAD3-213ENST00000560175 KIF28PB7ZC32 967 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 WNT7AO00755 349 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 OATP04181 439 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 MCM2P49736 904 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
SMAD3-213ENST00000560175 XKR3Q5GH77 459 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 TSHZ1Q6ZSZ6 1077 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 CRIPAKQ8N1N5 446 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 TMX3Q96JJ7 454 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 C8orf76Q96K31 380 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 MTMR9Q96QG7 549 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 RAD9AQ99638 391 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 AGO3Q9H9G7 860 aaKnown RBP14.88□□□□□ -0.03
SMAD3-213ENST00000560175 TRPV2Q9Y5S1 764 aa14.88□□□□□ -0.03
SMAD3-213ENST00000560175 IGKV6-21A0A0C4DH24 114 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 GPR32O75388 356 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 GHRP10912 638 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 POU3F3P20264 500 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-213ENST00000560175 U2AF2P26368 475 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMAD3-213ENST00000560175 PRKCEQ02156 737 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 TAP1Q03518 808 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 EPHA7Q15375 998 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 CKAP2LQ8IYA6 745 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-213ENST00000560175 MYLIPQ8WY64 445 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 FAM49AQ9H0Q0 323 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-213ENST00000560175 COL4A6Q14031 1691 aa14.87□□□□□ -0.03
SMAD3-213ENST00000560175 PRUNE2Q8WUY3 3088 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 ENPP3O14638 875 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 CHMP2AO43633 222 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 TLL1O43897 1013 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 ARHGEF15O94989 841 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 BAG4O95429 457 aaKnown RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 AMHP03971 560 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 P4HBP07237 508 aaKnown RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 CA3P07451 260 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 QARSP47897 775 aaKnown RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 PSMC5P62195 406 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 ORC2Q13416 577 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 SAFBQ15424 915 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 ANO5Q75V66 913 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 TMCO2Q7Z6W1 182 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-213ENST00000560175 CDHR5Q9HBB8 845 aa14.86□□□□□ -0.03
SMAD3-213ENST00000560175 CRYBB1P53674 252 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-213ENST00000560175 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 PPP2R2DQ66LE6 453 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 EFCAB12Q6NXP0 572 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 C4orf19Q8IY42 314 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 FTHL17Q9BXU8 183 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 ADAMTS10Q9H324 1103 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 WRAP73Q9P2S5 460 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-213ENST00000560175 PADI3Q9ULW8 664 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 PCDHA12Q9UN75 941 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 INSL6Q9Y581 213 aa14.85□□□□□ -0.03
SMAD3-213ENST00000560175 LCHNA4D1U4 455 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 M0QZ92 97 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 DKC1O60832 514 aaKnown RBP eCLIP14.84□□□□□ -0.033e-14■■□□□ 13.6
SMAD3-213ENST00000560175 SLITRK3O94933 977 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 LYPLA2O95372 231 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 CD52P31358 61 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 TRAPPC10P48553 1259 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 ADGRE1Q14246 886 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 NOSTRINQ8IVI9 506 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 FAM184AQ8NB25 1140 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 BANK1Q8NDB2 785 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 TMEM40Q8WWA1 233 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-213ENST00000560175 TMEM60Q9H2L4 133 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 PRDM12Q9H4Q4 367 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 RC3H2Q9HBD1 1191 aaKnown RBP14.84□□□□□ -0.03
SMAD3-213ENST00000560175 ERVK-5Q9HDB9 667 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 PPME1Q9Y570 386 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
SMAD3-213ENST00000560175 SPTBN5Q9NRC6 3674 aaKnown RBP14.83□□□□□ -0.04
SMAD3-213ENST00000560175 NEMFO60524 1076 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-213ENST00000560175 TMOD1P28289 359 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 FOSBP53539 338 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 ERVK-21P61565 698 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms