RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC26A2P50443 739 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 NPEPPSP55786 919 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 GLG1Q92896 1179 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 BPIFA3Q9BQP9 254 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 NIFKQ9BYG3 293 aaKnown RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 SMARCAD1Q9H4L7 1026 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 WBP1LQ9NX94 342 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 AKR1A1P14550 325 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 COASYQ13057 564 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 PSMD2Q13200 908 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CT47A1Q5JQC4 288 aaPredicted RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 TRIM50Q86XT4 487 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CEP170P1Q96L14 293 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 DYNC1LI2O43237 492 aaPredicted RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 ADCY3O60266 1144 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 MMP3P08254 477 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 ELNP15502 786 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 PRMT2P55345 433 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
HERC1-205ENST00000559886 STK4Q13043 487 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 PXYLP1Q8TE99 480 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 NRBP2Q9NSY0 501 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 HTTP42858 3142 aa13.53□□□□□ -0.24
HERC1-205ENST00000559886 A6NJR5 290 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 RSPH10B2B2RC85 870 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 LGALS2P05162 132 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 RSPH10BP0C881 870 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 TRIM32Q13049 653 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 IQCB1Q15051 598 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 RAET1EQ8TD07 263 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.24
HERC1-205ENST00000559886 HPS3Q969F9 1004 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 TIPINQ9BVW5 301 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.24
HERC1-205ENST00000559886 USO1O60763 962 aaKnown RBP13.52□□□□□ -0.25
HERC1-205ENST00000559886 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
HERC1-205ENST00000559886 HMGCRP04035 888 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 ZNF131P52739 623 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 TARBP2Q15633 366 aaKnown RBP13.52□□□□□ -0.25
HERC1-205ENST00000559886 DGKDQ16760 1214 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 HERC4Q5GLZ8 1057 aaPredicted RBP13.52□□□□□ -0.25
HERC1-205ENST00000559886 KIAA0895Q8NCT3 520 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 ATP8B4Q8TF62 1192 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.25
HERC1-205ENST00000559886 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 GRPEL1Q9HAV7 217 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 ERAP1Q9NZ08 941 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 KAT6AQ92794 2004 aa13.52□□□□□ -0.25
HERC1-205ENST00000559886 SEPT4O43236 478 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
HERC1-205ENST00000559886 DGAT1O75907 488 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 GAP43P17677 238 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
HERC1-205ENST00000559886 PRCPP42785 496 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 MAPK7Q13164 816 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 PLCB4Q15147 1175 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 MTERF2Q49AM1 385 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 LUZP1Q86V48 1076 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 DAW1Q8N136 415 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 SLC39A2Q9NP94 309 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 HIP1RO75146 1068 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 FAM13AO94988 1023 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
HERC1-205ENST00000559886 MARK3P27448 753 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 DHX40Q8IX18 779 aaKnown RBP13.51□□□□□ -0.25
HERC1-205ENST00000559886 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 PARVGQ9HBI0 331 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
HERC1-205ENST00000559886 SFI1A8K8P3 1242 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 MRE11P49959 708 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 SFR1Q86XK3 245 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 DHX33Q9H6R0 707 aaKnown RBP13.5□□□□□ -0.25
HERC1-205ENST00000559886 OLFML3Q9NRN5 406 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 SEL1LQ9UBV2 794 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 MAPK8IP1Q9UQF2 711 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms