RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 BIN1O00499 593 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 ZEB2O60315 1214 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 USO1O60763 962 aaKnown RBP11.61□□□□□ -0.55
TPM1-221ENST00000559831 STBD1O95210 358 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 XRCC6P12956 609 aaKnown RBP eCLIP11.61□□□□□ -0.55
TPM1-221ENST00000559831 HOXD8P13378 290 aaPredicted RBP11.61□□□□□ -0.55
TPM1-221ENST00000559831 CYP11B2P19099 503 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 RARRES1P49788 294 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
TPM1-221ENST00000559831 DPYDQ12882 1025 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 ANO5Q75V66 913 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 ATP8B4Q8TF62 1192 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 TRIM9Q9C026 710 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.55
TPM1-221ENST00000559831 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 CYP26B1Q9NR63 512 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 ERAP1Q9NZ08 941 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 PCDHA5Q9Y5H7 936 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 CEP350Q5VT06 3117 aa11.61□□□□□ -0.55
TPM1-221ENST00000559831 TRIP12Q14669 1992 aaPredicted RBP11.61□□□□□ -0.55
TPM1-221ENST00000559831 H3BRB1 525 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 MSCO60682 206 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 ADAMTS4O75173 837 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 RPN1P04843 607 aaKnown RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 IDEP14735 1019 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 PSEN2P49810 448 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 SLC26A2P50443 739 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 GNASQ5JWF2 1037 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 ISM2Q6H9L7 571 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 FBXO46Q6PJ61 603 aaPredicted RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 SASS6Q6UVJ0 657 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 RBM43Q6ZSC3 357 aaKnown RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 DDX12PQ92771 950 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 CCDC47Q96A33 483 aaKnown RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 RNPEPQ9H4A4 650 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 TUT1Q9H6E5 874 aaKnown RBP11.6□□□□□ -0.55
TPM1-221ENST00000559831 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
TPM1-221ENST00000559831 PCNTO95613 3336 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 HBP1O60381 514 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 TBCAO75347 108 aaKnown RBP11.59□□□□□ -0.55
TPM1-221ENST00000559831 FAM13AO94988 1023 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 MYL1P05976 194 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 CCL5P13501 91 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 POLGP54098 1239 aaPredicted RBP11.59□□□□□ -0.55
TPM1-221ENST00000559831 IGBP1P78318 339 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
TPM1-221ENST00000559831 MFSD10Q14728 455 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 MTFR1Q15390 333 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
TPM1-221ENST00000559831 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 C1orf186Q6ZWK4 172 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 RNF180Q86T96 592 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 PPP1R13LQ8WUF5 828 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 TRAPPC12Q8WVT3 735 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 ANP32EQ9BTT0 268 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
TPM1-221ENST00000559831 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 SCN10AQ9Y5Y9 1956 aa11.59□□□□□ -0.55
TPM1-221ENST00000559831 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KLRC4O43908 158 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KPNA6O60684 536 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 HIP1RO75146 1068 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 F2P00734 622 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 INSRRP14616 1297 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 PURAQ00577 322 aaKnown RBP11.58□□□□□ -0.56
TPM1-221ENST00000559831 TBC1D8BQ0IIM8 1120 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 GIT2Q14161 759 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 EMC2Q15006 297 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 LRRC41Q15345 812 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KCNA10Q16322 511 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KIAA0753Q2KHM9 967 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KMT5BQ4FZB7 885 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 FAM102BQ5T8I3 360 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 LHX8Q68G74 356 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 CXCL17Q6UXB2 119 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 UNC13DQ70J99 1090 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 CCDC65Q8IXS2 484 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 PCSK9Q8NBP7 692 aaKnown RBP11.58□□□□□ -0.56
TPM1-221ENST00000559831 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 KAT2BQ92831 832 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 MTG1Q9BT17 334 aaPredicted RBP11.58□□□□□ -0.56
TPM1-221ENST00000559831 KATNAL1Q9BW62 490 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 ATP6V0A4Q9HBG4 840 aa11.58□□□□□ -0.56
TPM1-221ENST00000559831 PANK4Q9NVE7 773 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms