RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 FAM13AO94988 1023 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 HEXIM1O94992 359 aaKnown RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 CYP3A4P08684 503 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 FAM153BP0C7A2 387 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 EPB41P11171 864 aaKnown RBP11□□□□□ -0.65
LRRC28-216ENST00000559819 STAT2P52630 851 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 FAM153CQ494X1 144 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 LRCH2Q5VUJ6 765 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 GOLGA6L1Q8N7Z2 621 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 IFT81Q8WYA0 676 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 HSD17B14Q9BPX1 270 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 EPB41L5Q9HCM4 733 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 PLCB1Q9NQ66 1216 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 FAM153AQ9UHL3 310 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 TSKSQ9UJT2 592 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 NFU1Q9UMS0 254 aa11□□□□□ -0.65
LRRC28-216ENST00000559819 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 ZNF646O15015 1829 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-216ENST00000559819 ENTPD3O75355 529 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 NOP2P46087 812 aaKnown RBP10.99□□□□□ -0.65
LRRC28-216ENST00000559819 GUCY2DQ02846 1103 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 GBP6Q6ZN66 633 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 INPP4AQ96PE3 977 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-216ENST00000559819 KCNK3O14649 394 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
LRRC28-216ENST00000559819 GFPT2O94808 682 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 ARP10275 920 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 EPHB4P54760 987 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 SKIDA1Q1XH10 827 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 KLHL7Q8IXQ5 586 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 BANK1Q8NDB2 785 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 PKD2L1Q9P0L9 805 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
LRRC28-216ENST00000559819 DDX39AO00148 427 aaKnown RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 SLC16A3O15427 465 aaKnown RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 PPIP5K2O43314 1243 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 PSMD10O75832 226 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GUCY2FP51841 1108 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 CC2D2BQ6DHV5 1058 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 STYK1Q6J9G0 422 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 ALKBH5Q6P6C2 394 aaKnown RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 CASKIN2Q8WXE0 1202 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 ARL8AQ96BM9 186 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 FBXO28Q9NVF7 368 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GOLGA6CA6NDK9 693 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GCOM1H8Y6P7 765 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 POLR2MP0CAP2 368 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GOLGA6DP0CG33 693 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 TRIM49P0CI25 452 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 TRIM49CP0CI26 452 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 RPL13P26373 211 aaKnown RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 CYP2J2P51589 502 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 JAM2P57087 298 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 IRX5P78411 483 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 PLS1Q14651 629 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 U2AF1L4Q8WU68 220 aaKnown RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 BORCS6Q96GS4 357 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GLIS2Q9BZE0 524 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-216ENST00000559819 UNC45AQ9H3U1 944 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GDF3Q9NR23 364 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 GOLGA6AQ9NYA3 693 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 BCS1LQ9Y276 419 aa10.98□□□□□ -0.65
LRRC28-216ENST00000559819 TMCO5BA8MYB1 307 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 DDX3XO00571 662 aaKnown RBP eCLIP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RAD51CO43502 376 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 GAS7O60861 476 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 KIF4AO95239 1232 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 PRELPP51888 382 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RPS6KA1Q15418 735 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TTMPQ5BVD1 217 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 DNAJC21Q5F1R6 531 aaKnown RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TTC19Q6DKK2 380 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 USP38Q8NB14 1042 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 FAM76AQ8TAV0 307 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 LNX1Q8TBB1 728 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RUBCNQ92622 972 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TAF4BQ92750 862 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 SLC5A5Q92911 643 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RABEP2Q9H5N1 569 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 METTL14Q9HCE5 456 aaKnown RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 OLFML3Q9NRN5 406 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TULP2O00295 520 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 C21orf2O43822 256 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RAD17O75943 681 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 GAP43P17677 238 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TNFRSF8P28908 595 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CBWD6Q4V339 395 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CBWD3Q5JTY5 395 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CBWD5Q5RIA9 395 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms