RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TMEM132BQ14DG7 1078 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 EIF4HQ15056 248 aaKnown RBP5.54□□□□□ -1.52
SPG11-218ENST00000559754 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
SPG11-218ENST00000559754 ZNF585AQ6P3V2 769 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 TAX1BP1Q86VP1 789 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 UBXN4Q92575 508 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 E2F7Q96AV8 911 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 Q9UFV3 132 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 PTPN22Q9Y2R2 807 aa5.54□□□□□ -1.52
SPG11-218ENST00000559754 MUSKO15146 869 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 RAPGEF3O95398 923 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 TNFRSF1AP19438 455 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 CR2P20023 1033 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 FLT3P36888 993 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 MEOX1P50221 254 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 CD83Q01151 205 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 NFYCQ13952 458 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 GRAMD4Q6IC98 578 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 ZCCHC8Q6NZY4 707 aaKnown RBP5.53□□□□□ -1.52
SPG11-218ENST00000559754 ABHD17CQ6PCB6 329 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 OTOP1Q7RTM1 612 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 Q8TCH9 128 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 SH3RF3Q8TEJ3 882 aaPredicted RBP5.53□□□□□ -1.52
SPG11-218ENST00000559754 AMNQ9BXJ7 453 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 ZSWIM4Q9H7M6 989 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 OAZ3Q9UMX2 235 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 ZFR2Q9UPR6 939 aaKnown RBP5.53□□□□□ -1.52
SPG11-218ENST00000559754 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
SPG11-218ENST00000559754 PRAMEF22A3QJZ6 481 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 GOLGA6L22H0YM25 854 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 M0R2C6 588 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 MATN3O15232 486 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 ARHGAP6O43182 974 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 OPA1O60313 960 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 MAFO75444 373 aaPredicted RBP5.52□□□□□ -1.53
SPG11-218ENST00000559754 APEX1P27695 318 aaKnown RBP5.52□□□□□ -1.53
SPG11-218ENST00000559754 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 KANK2Q63ZY3 851 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 TCTN3Q6NUS6 607 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 USP30Q70CQ3 517 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 RTKN2Q8IZC4 609 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 GNRHR2Q96P88 292 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 TESMINQ9Y4I5 508 aa5.52□□□□□ -1.53
SPG11-218ENST00000559754 RASSF10A6NK89 507 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 FOXS1O43638 330 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 ZBTB48P10074 688 aaPredicted RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 RPS19P39019 145 aaKnown RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 FNTBP49356 437 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 ALDH6A1Q02252 535 aaKnown RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 MOGSQ13724 837 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 CDSNQ15517 529 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 CATSPEREQ5SY80 951 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 AGBL4Q5VU57 503 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 TRIM68Q6AZZ1 485 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 LRSAM1Q6UWE0 723 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 UBE2R2Q712K3 238 aaPredicted RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 SYNPOQ8N3V7 929 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 CHST14Q8NCH0 376 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 SH3TC2Q8TF17 1288 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 FOXB1Q99853 325 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 OR10A2Q9H208 303 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 C12orf65Q9H3J6 166 aaKnown RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 TMPRSS5Q9H3S3 457 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 ACSS2Q9NR19 701 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 PUF60Q9UHX1 559 aaKnown RBP5.51□□□□□ -1.53
SPG11-218ENST00000559754 CDC42EP3Q9UKI2 254 aa5.51□□□□□ -1.53
SPG11-218ENST00000559754 H7C1D1 291 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 CDC14BO60729 498 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 KRT37O76014 449 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 MECP2P51608 486 aaKnown RBP5.5□□□□□ -1.53
SPG11-218ENST00000559754 ZXDAP98168 799 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 SQSTM1Q13501 440 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 PCOLCEQ15113 449 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
SPG11-218ENST00000559754 FSTL4Q6MZW2 842 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 LARP4Q71RC2 724 aaKnown RBP eCLIP5.5□□□□□ -1.53
SPG11-218ENST00000559754 PALM2Q8IXS6 379 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 CLUHP3Q96NS8 147 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 PCIF1Q9H4Z3 704 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
SPG11-218ENST00000559754 TNPO3Q9Y5L0 923 aaKnown RBP5.5□□□□□ -1.53
SPG11-218ENST00000559754 RFPL3O75679 317 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 DNAJC8O75937 253 aaPredicted RBP5.49□□□□□ -1.53
SPG11-218ENST00000559754 RAD17O75943 681 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
SPG11-218ENST00000559754 CYP17A1P05093 508 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 COMTP21964 271 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 MRE11P49959 708 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 KIF11P52732 1056 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 SESN2P58004 480 aaPredicted RBP5.49□□□□□ -1.53
SPG11-218ENST00000559754 ROM1Q03395 351 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 R3HDM1Q15032 1099 aaKnown RBP5.49□□□□□ -1.53
SPG11-218ENST00000559754 ZNF174Q15697 407 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms