RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KLRG1Q96E93 195 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 MAFGO15525 162 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 RGS2P41220 211 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 EXOC3L4Q17RC7 722 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 TWF2Q6IBS0 349 aaKnown RBP11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 MTRQ99707 1265 aa11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
CARMIL3-202ENST00000559694 GSTTP1A0A1W2PQM5 241 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA6BA6NDN3 693 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 CLDN3O15551 220 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 MAPK4P31152 587 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 MAGEA1P43355 309 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 POLR2FP61218 127 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 PLCB3Q01970 1234 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 MSTO1Q9BUK6 570 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 AGXT2Q9BYV1 514 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 MYO1CO00159 1063 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 TLR3O15455 904 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 RARBP10826 455 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 YWHABP31946 246 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 PTPN21Q16825 1174 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 MYCBPQ99417 103 aaPredicted RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 SAMSN1Q9NSI8 373 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 TBX3O15119 743 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 LIG3P49916 1009 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 GYS2P54840 703 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 ZCCHC17Q9NP64 241 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 TBC1D12O60347 775 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 ATF7P17544 494 aaPredicted RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 PHKA2P46019 1235 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 COPB1P53618 953 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 RGMBQ6NW40 437 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 RNF34Q969K3 372 aa11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
CARMIL3-202ENST00000559694 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 FOXN1O15353 648 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 PIK3CAP42336 1068 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 TNFAIP2Q03169 654 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 PPIL2Q13356 520 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 XRRA1Q6P2D8 792 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 DCUN1D2Q6PH85 259 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 CYP26C1Q6V0L0 522 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 TMTC1Q8IUR5 882 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 CCDC50Q8IVM0 306 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 OR8K1Q8NGG5 319 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 EXOC4Q96A65 974 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 RIT2Q99578 217 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 PARD6BQ9BYG5 372 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 NACA2Q9H009 215 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 YWHAEP62258 255 aaKnown RBP11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 DLK2Q6UY11 383 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 POLR3FQ9H1D9 316 aaPredicted RBP11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 FZD9O00144 591 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 CYTH3O43739 400 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 EYA4O95677 639 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 DGKZQ13574 1117 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 PHLPP2Q6ZVD8 1323 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 MKL1Q969V6 931 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 ANKRD36BP1Q96IX9 119 aa11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 RPF1Q9H9Y2 349 aaKnown RBP11.58□□□□□ -0.56
CARMIL3-202ENST00000559694 GOLGA6L10A0A0M3HER8 536 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ABCD1P33897 745 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 PKN1Q16512 942 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 TMEM143Q96AN5 459 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 NT5C1BQ96P26 610 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 FERMT1Q9BQL6 677 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 PDCD2LQ9BRP1 358 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 INPP5FQ9Y2H2 1132 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 FAN1Q9Y2M0 1017 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 SPOPO43791 374 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 ARP10275 920 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 NPEPPSP55786 919 aa11.57□□□□□ -0.56
CARMIL3-202ENST00000559694 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms