RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LYPLA2O95372 231 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 C22orf31O95567 290 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 BRD1O95696 1058 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 BMP15O95972 392 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 BMP8BP34820 402 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 NPEPPSP55786 919 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 CEBPZQ03701 1054 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 GPNMBQ14956 572 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 MTERF2Q49AM1 385 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 C16orf59Q7L2K0 433 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 ZNF579Q8NAF0 562 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 TUFT1Q9NNX1 390 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 SCN5AQ14524 2016 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 SMIM35A0A1B0GVV1 85 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 VWA3AA6NCI4 1184 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 PP2D1A8MPX8 630 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 RPA1P27694 616 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 CDC25AP30304 524 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 YWHABP31946 246 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 PLA2G4FQ68DD2 849 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 LRRC8DQ7L1W4 858 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 KIAA0319LQ8IZA0 1049 aa22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 UBE2OQ9C0C9 1292 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 FAM49AQ9H0Q0 323 aaPredicted RBP22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 TFIP11Q9UBB9 837 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 COLQQ9Y215 455 aaPredicted RBP22.71■■□□□ 1.23
TSPAN3-207ENST00000559494 MAGEB2O15479 319 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 ACRP10323 421 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 PPIGQ13427 754 aaKnown RBP eCLIP22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 MBTPS1Q14703 1052 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 ECM1Q16610 540 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 ERMNQ8TAM6 284 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 RAB34Q9BZG1 259 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 CYP26B1Q9NR63 512 aa22.7■■□□□ 1.22
TSPAN3-207ENST00000559494 TRIOBPQ9H2D6 2365 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 CAND2O75155 1236 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 CHRNA1P02708 482 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 GRIN1Q05586 938 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 FOXD4L6Q3SYB3 417 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 FAM26DQ5JW98 314 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 EFCAB12Q6NXP0 572 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 FOXD4L3Q6VB84 417 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 OTUD6AQ7L8S5 288 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 LINC01465Q8N7H1 131 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 PIGOQ8TEQ8 1089 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 MMTAG2Q9BU76 263 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 OSBPL7Q9BZF2 842 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 IL23AQ9NPF7 189 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 TSHZ2Q9NRE2 1034 aa22.69■■□□□ 1.22
TSPAN3-207ENST00000559494 NBNO60934 754 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 CTSHP09668 335 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 MARCKSP29966 332 aaPredicted RBP22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 CCT6AP40227 531 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 TBC1D8BQ0IIM8 1120 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 SLC39A14Q15043 492 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 XKR9Q5GH70 373 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 DEFB128Q7Z7B8 93 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 RSPH3Q86UC2 560 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 NME8Q8N427 588 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 LRRC71Q8N4P6 559 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 METTL13Q8N6R0 699 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 CEP170P1Q96L14 293 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 ZNF396Q96N95 335 aaPredicted RBP22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 ANKEF1Q9NU02 776 aa22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
TSPAN3-207ENST00000559494 IGKV6-21A0A0C4DH24 114 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 MAFO75444 373 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 XRCC6P12956 609 aaKnown RBP eCLIP22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 RFC2P35250 354 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 NASPP49321 788 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 CLCN3P51790 818 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 MGAT3Q09327 533 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 MKRN4PQ13434 485 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 TMEM240Q5SV17 173 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 HAUS3Q68CZ6 603 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 POTEGQ6S5H5 508 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 RPUSD2Q8IZ73 545 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 SNX29Q8TEQ0 813 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.67■■□□□ 1.222e-7■■■■□ 20.1
TSPAN3-207ENST00000559494 SUGCTQ9HAC7 445 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 STK24Q9Y6E0 443 aa22.67■■□□□ 1.22
TSPAN3-207ENST00000559494 MYH15Q9Y2K3 1946 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 SLC34A2O95436 690 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 PARNO95453 639 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 MUTP22033 750 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 DDIT3P35638 169 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 MRPS6P82932 125 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 TMEM62Q0P6H9 643 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 SHHQ15465 462 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 C9orf50Q5SZB4 431 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 KRT79Q5XKE5 535 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 ZNF365Q70YC5 407 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 LINC00301Q8NCQ3 95 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 NACC1Q96RE7 527 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 FBXO2Q9UK22 296 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 CDY2AQ9Y6F7 541 aa22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 MORC2Q9Y6X9 1032 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-207ENST00000559494 TANC1Q9C0D5 1861 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms