RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 KIF2CQ99661 725 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 NRBP2Q9NSY0 501 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 SEPT9Q9UHD8 586 aaPredicted RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 CEP131Q9UPN4 1083 aa9.23□□□□□ -0.93
SNX1-207ENST00000559401 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
SNX1-207ENST00000559401 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 LCHNA4D1U4 455 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 BTBD18B2RXH4 712 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 ZNF862O60290 1169 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 GJB5O95377 273 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 C22orf31O95567 290 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 CD52P31358 61 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 CLCN3P51790 818 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 HMGN5P82970 282 aaKnown RBP9.22□□□□□ -0.93
SNX1-207ENST00000559401 PAK2Q13177 524 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 MTERF2Q49AM1 385 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 EARS2Q5JPH6 523 aaKnown RBP9.22□□□□□ -0.93
SNX1-207ENST00000559401 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 NCAPH2Q6IBW4 605 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 PPP4R3AQ6IN85 833 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 POTEDQ86YR6 584 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 BANK1Q8NDB2 785 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 RDM1Q8NG50 284 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 ETNPPLQ8TBG4 499 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 MBOAT7Q96N66 472 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 SCLT1Q96NL6 688 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 MAP7D2Q96T17 732 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 YME1L1Q96TA2 773 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 RAD9AQ99638 391 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 LLPHQ9BRT6 129 aaKnown RBP9.22□□□□□ -0.93
SNX1-207ENST00000559401 CELF4Q9BZC1 486 aaKnown RBP9.22□□□□□ -0.93
SNX1-207ENST00000559401 SUGCTQ9HAC7 445 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 AKT3Q9Y243 479 aa9.22□□□□□ -0.93
SNX1-207ENST00000559401 NLRC5Q86WI3 1866 aa9.21□□□□□ -0.93
SNX1-207ENST00000559401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
SNX1-207ENST00000559401 RFXAPO00287 272 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 MAGEB2O15479 319 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 ARHGEF15O94989 841 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 VTNP04004 478 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 TMOD1P28289 359 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 TAP1Q03518 808 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 TBC1D8BQ0IIM8 1120 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
SNX1-207ENST00000559401 CCDC85BQ15834 202 aaPredicted RBP9.21□□□□□ -0.94
SNX1-207ENST00000559401 KIZQ2M2Z5 673 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 EFCAB12Q6NXP0 572 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 SLFN12Q8IYM2 578 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 NME8Q8N427 588 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 LRRC71Q8N4P6 559 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 USP38Q8NB14 1042 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 TNFRSF25Q93038 417 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 FAM20AQ96MK3 541 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 AGO3Q9H9G7 860 aaKnown RBP9.21□□□□□ -0.94
SNX1-207ENST00000559401 INSL6Q9Y581 213 aa9.21□□□□□ -0.94
SNX1-207ENST00000559401 ARID2Q68CP9 1835 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 TMEM150BA6NC51 233 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 ZBTB42B2RXF5 422 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 EML1O00423 815 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 TBX3O15119 743 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
SNX1-207ENST00000559401 NEMFO60524 1076 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 DKC1O60832 514 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNX1-207ENST00000559401 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 PSMC5P62195 406 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 PPP2R5CQ13362 524 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 ADGRE1Q14246 886 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 CALCRLQ16602 461 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 KIAA0319LQ8IZA0 1049 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 TOP1MTQ969P6 601 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 ZNF668Q96K58 619 aaPredicted RBP9.2□□□□□ -0.94
SNX1-207ENST00000559401 OSMRQ99650 979 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 SH2D3AQ9BRG2 576 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 FTHL17Q9BXU8 183 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 KCNMB3Q9NPA1 279 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 VAV3Q9UKW4 847 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 PADI3Q9ULW8 664 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 KIF3AQ9Y496 699 aa9.2□□□□□ -0.94
SNX1-207ENST00000559401 DENND3A2RUS2 1198 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 EPOPA6NHQ4 379 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 MCM7P33993 719 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 TXKP42681 527 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 QARSP47897 775 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 DNM2P50570 870 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 NLRP11P59045 1033 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 SKIV2LQ15477 1246 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 ODR4Q5SWX8 454 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 PLA2G4FQ68DD2 849 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 B3GNT9Q6UX72 402 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX1-207ENST00000559401 GDPD5Q8WTR4 605 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms