RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 LRRC2Q9BYS8 371 aa18.54■□□□□ 0.56
CDC42BPB-205ENST00000559245 CDHR5Q9HBB8 845 aa18.54■□□□□ 0.56
CDC42BPB-205ENST00000559245 AGO4Q9HCK5 861 aaKnown RBP18.54■□□□□ 0.56
CDC42BPB-205ENST00000559245 TLR9Q9NR96 1032 aa18.54■□□□□ 0.56
CDC42BPB-205ENST00000559245 AAASQ9NRG9 546 aa18.54■□□□□ 0.56
CDC42BPB-205ENST00000559245 DENND3A2RUS2 1198 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 SLC27A2O14975 620 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 HBP1O60381 514 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 NAPAP54920 295 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 RBM10P98175 930 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 PKN1Q16512 942 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 FAM102BQ5T8I3 360 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 IER5LQ5T953 404 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 TYW1BQ6NUM6 668 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 PHOX2BQ99453 314 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 ADAM2Q99965 735 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 ANO3Q9BYT9 981 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 RGS18Q9NS28 235 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
CDC42BPB-205ENST00000559245 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 IGKV6D-21A0A0A0MT36 114 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 DDX39AO00148 427 aaKnown RBP18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 MEIS1O00470 390 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 FGF18O76093 207 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 FOSP01100 380 aaPredicted RBP18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 PTPN5P54829 565 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 ERVFC1P60507 584 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 ODR4Q5SWX8 454 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 SLC24A5Q71RS6 500 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 SGMS1Q86VZ5 419 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 SUGP1Q8IWZ8 645 aaKnown RBP18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 KIAA0319LQ8IZA0 1049 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 VN1R2Q8NFZ6 395 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 TMEM40Q8WWA1 233 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 C1orf112Q9NSG2 853 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 HCSTQ9UBK5 93 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 ST3GAL5Q9UNP4 418 aa18.52■□□□□ 0.56
CDC42BPB-205ENST00000559245 COL1A2P08123 1366 aa18.52■□□□□ 0.55
CDC42BPB-205ENST00000559245 CACNA1HO95180 2353 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 C9IYK1 514 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 BACH1O14867 736 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 CCNE2O96020 404 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 ATF7P17544 494 aaPredicted RBP18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 DUSP6Q16828 381 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 FAM160B1Q5W0V3 765 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 PPP1R18Q6NYC8 613 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 ABHD15Q6UXT9 468 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 CCDC60Q8IWA6 550 aaPredicted RBP18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 TEX2Q8IWB9 1127 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 THNSL1Q8IYQ7 743 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 FBXL6Q8N531 539 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 COLGALT1Q8NBJ5 622 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 SUSD6Q92537 303 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 CDCA3Q99618 268 aaPredicted RBP18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 PRRX2Q99811 253 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 TMEM260Q9NX78 707 aa18.51■□□□□ 0.55
CDC42BPB-205ENST00000559245 GPR182O15218 404 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 ZNF76P36508 570 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 SREBF1P36956 1147 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 ADCY7P51828 1080 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 SIGLEC14Q08ET2 396 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 ZNF484Q5JVG2 852 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 CREB3L3Q68CJ9 461 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 PDE12Q6L8Q7 609 aaKnown RBP18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 PDXDC2PQ6P474 469 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 SYNE3Q6ZMZ3 975 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 ZNF302Q9NR11 478 aa18.5■□□□□ 0.55
CDC42BPB-205ENST00000559245 ZBTB42B2RXF5 422 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 FSCN2O14926 492 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 TCF15Q12870 199 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 FAM228AQ86W67 206 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 PPP1R16BQ96T49 567 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 CWH43Q9H720 699 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 ATP6V0A4Q9HBG4 840 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 RBM28Q9NW13 759 aaKnown RBP18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 TMEM161AQ9NX61 479 aa18.49■□□□□ 0.55
CDC42BPB-205ENST00000559245 SMCO2A6NFE2 343 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 FGFR1P11362 822 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 LAG3P18627 525 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 CRYBB1P53674 252 aaPredicted RBP18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 FAM189BP81408 668 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 AP3B2Q13367 1082 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 KIZQ2M2Z5 673 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 PLPP4Q5VZY2 271 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
CDC42BPB-205ENST00000559245 APOA5Q6Q788 366 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms