RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 FTHL17Q9BXU8 183 aa11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 EPHX3Q9H6B9 360 aa11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
CTDSPL2-205ENST00000558968 KDM3AQ9Y4C1 1321 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 EDIL3O43854 480 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 MGEA5O60502 916 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 IFNAR1P17181 557 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 NFX1Q12986 1120 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 PTCRAQ6ISU1 281 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 ZNF746Q6NUN9 644 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 RUFY3Q7L099 469 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 NPAS4Q8IUM7 802 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 CRIPAKQ8N1N5 446 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 NME8Q8N427 588 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 TMEM40Q8WWA1 233 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 LENG9Q96B70 501 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 ALG13Q9NP73 1137 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 RWDD3Q9Y3V2 267 aa11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-205ENST00000558968 TRIOO75962 3097 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 RPS6KA5O75582 802 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 C22orf31O95567 290 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 VTNP04004 478 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 RB1P06400 928 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 PSAPP07602 524 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 CIITAP33076 1130 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 EVCP57679 992 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 STK3Q13188 491 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 GJA10Q969M2 543 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 PABPC5Q96DU9 382 aaKnown RBP11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 OSMRQ99650 979 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 CLDND1Q9NY35 253 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-205ENST00000558968 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 MSH4O15457 936 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 CHMP2AO43633 222 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 CLCN3P51790 818 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 NLRP5P59047 1200 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 SSRP1Q08945 709 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 FAM178BQ8IXR5 827 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 C1QTNF1Q9BXJ1 281 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 LMAN2LQ9H0V9 348 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 ST3GAL5Q9UNP4 418 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
CTDSPL2-205ENST00000558968 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 ZNF862O60290 1169 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 GPR32O75388 356 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 MMP1P03956 469 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 ITGB1P05556 798 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 DNAJB1P25685 340 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 CRYBB1P53674 252 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 DLX2Q07687 328 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 HYAL1Q12794 435 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 CAMK1Q14012 370 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 CLUL1Q15846 466 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 UGCGQ16739 394 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 KLHL23Q8NBE8 558 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 ADAM2Q99965 735 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 UNC45AQ9H3U1 944 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 SH3GLB2Q9NR46 395 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 PCDHA4Q9UN74 947 aa11.69□□□□□ -0.54
CTDSPL2-205ENST00000558968 PLAGL2Q9UPG8 496 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms