RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 SMIM35A0A1B0GVV1 85 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 TMEM150BA6NC51 233 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 KIF28PB7ZC32 967 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 M0QZ92 97 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 NEMFO60524 1076 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 GNL2Q13823 731 aaKnown RBP12.39□□□□□ -0.43
PBX1-213ENST00000558796 LPIN1Q14693 890 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 CALCRLQ16602 461 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 FAM117BQ6P1L5 589 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 FBXO18Q8NFZ0 1043 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 FAM20AQ96MK3 541 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 IFIH1Q9BYX4 1025 aaKnown RBP12.39□□□□□ -0.43
PBX1-213ENST00000558796 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
PBX1-213ENST00000558796 PCDHA11Q9Y5I1 949 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
PBX1-213ENST00000558796 FNDC1Q4ZHG4 1894 aaPredicted RBP12.39□□□□□ -0.43
PBX1-213ENST00000558796 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 TBX3O15119 743 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 CA3P07451 260 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 MCM7P33993 719 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 MCM2P49736 904 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 CLCN3P51790 818 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 IER5Q5VY09 327 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
PBX1-213ENST00000558796 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 METTL13Q8N6R0 699 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 MYLIPQ8WY64 445 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 CDX2Q99626 313 aaPredicted RBP12.38□□□□□ -0.43
PBX1-213ENST00000558796 SH2D3AQ9BRG2 576 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
PBX1-213ENST00000558796 CEP131Q9UPN4 1083 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
PBX1-213ENST00000558796 TLL1O43897 1013 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 EFCAB14O75071 495 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 BAG4O95429 457 aaKnown RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 VTNP04004 478 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 GJB2P29033 226 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 CD52P31358 61 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 PSMC5P62195 406 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 PLA2G4FQ68DD2 849 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 TSHZ1Q6ZSZ6 1077 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 NOSTRINQ8IVI9 506 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 LRRC71Q8N4P6 559 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 PHOSPHO2Q8TCD6 241 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 APBB2Q92870 758 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 CELF4Q9BZC1 486 aaKnown RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
PBX1-213ENST00000558796 WRAP73Q9P2S5 460 aaPredicted RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 PRRC2BQ5JSZ5 2229 aaKnown RBP12.37□□□□□ -0.43
PBX1-213ENST00000558796 MYH11P35749 1972 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 COL4A6Q14031 1691 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 STBD1O95210 358 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 AMHP03971 560 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 TXKP42681 527 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 NBR1Q14596 966 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 TMEM266Q2M3C6 531 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 EFCAB12Q6NXP0 572 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 LXNQ9BS40 222 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
PBX1-213ENST00000558796 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 AKT3Q9Y243 479 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 STXBP5LQ9Y2K9 1186 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
PBX1-213ENST00000558796 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 POTEMA6NI47 508 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 MAGEB2O15479 319 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 UPP2O95045 317 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 GJB5O95377 273 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 P4HBP07237 508 aaKnown RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 PAK2Q13177 524 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 TARBP2Q15633 366 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms