RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 HDAC8Q9BY41 377 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 API5Q9BZZ5 524 aaKnown RBP5.27□□□□□ -1.57
SPG11-211ENST00000558561 KLHL25Q9H0H3 589 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 VPS33BQ9H267 617 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 PRDM7Q9NQW5 492 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 PGAP2Q9UHJ9 254 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 H7C1D1 291 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 SIGLEC6O43699 453 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 PDE8BO95263 885 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 GJB6O95452 261 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 CT47B1P0C2W7 299 aaPredicted RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 UBTFL1P0CB47 393 aaPredicted RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 ATP8B2P98198 1209 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 ZP2Q05996 745 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 TFCP2Q12800 502 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 FSTL1Q12841 308 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 NCAPHQ15003 741 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 TCEAL1Q15170 157 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 METTL24Q5JXM2 366 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 NOL9Q5SY16 702 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 TMPRSS7Q7RTY8 843 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 ADAT2Q7Z6V5 191 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 LDHDQ86WU2 507 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 DAGLBQ8NCG7 672 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 ADCY4Q8NFM4 1077 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 TDRD7Q8NHU6 1098 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 DPF2Q92785 391 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 TCTN2Q96GX1 697 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 DNAJC2Q99543 621 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 ANKRD2Q9GZV1 360 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 CARS2Q9HA77 564 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 ADARB2Q9NS39 739 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 CHST7Q9NS84 486 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 DUSP13Q9UII6 198 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 PCDHA11Q9Y5I1 949 aa5.26□□□□□ -1.57
SPG11-211ENST00000558561 MYO5AQ9Y4I1 1855 aaKnown RBP5.26□□□□□ -1.57
SPG11-211ENST00000558561 PSME4Q14997 1843 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 WNT10BO00744 389 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 SRGAP3O43295 1099 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 HSP90B1P14625 803 aaKnown RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 IL1R1P14778 569 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 FUT4P22083 530 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 HIBADHP31937 336 aaKnown RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 CTSKP43235 329 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 PHKA1P46020 1223 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 KCNJ4P48050 445 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 ZNF280AP59817 542 aaPredicted RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 CHAF1AQ13111 956 aaPredicted RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 GRM1Q13255 1194 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 PRKG1Q13976 671 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 UBE4AQ14139 1066 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 DDR2Q16832 855 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 ANGEL2Q5VTE6 544 aaKnown RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 CYP4F22Q6NT55 531 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 C15orf52Q6ZUT6 534 aaKnown RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 USP50Q70EL3 339 aaPredicted RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 ZNF655Q8N720 491 aaPredicted RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 ARMC5Q96C12 935 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 ZBED3Q96IU2 234 aaPredicted RBP5.25□□□□□ -1.57
SPG11-211ENST00000558561 TRIM55Q9BYV6 548 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 COA1Q9GZY4 146 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 MYOZ2Q9NPC6 264 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 APEX2Q9UBZ4 518 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 RCAN3Q9UKA8 241 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 MED23Q9ULK4 1368 aa5.25□□□□□ -1.57
SPG11-211ENST00000558561 CLRN2A0PK11 232 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ANKRD34BA5PLL1 514 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 UBE2Q2LH0YL09 131 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 IPO8O15397 1037 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 CELF2O95319 508 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 GNAI2P04899 355 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ITGA4P13612 1032 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 CACNB3P54284 484 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 GP2P55259 537 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 EGR3Q06889 387 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 PPP2R5DQ14738 602 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 PLCL1Q15111 1095 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 CFAP100Q494V2 611 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 STRIP1Q5VSL9 837 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 PNMA8AQ86V59 439 aaPredicted RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 ITPRIPQ8IWB1 547 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ZFPM1Q8IX07 1006 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ABI1Q8IZP0 508 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 FIBCD1Q8N539 461 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ZNF513Q8N8E2 541 aaPredicted RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 AGBL3Q8NEM8 1001 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ZNF384Q8TF68 577 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 APBA2Q99767 749 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 DSCC1Q9BVC3 393 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 LGR4Q9BXB1 951 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 FOXP3Q9BZS1 431 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 CCDC8Q9H0W5 538 aaPredicted RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 NOL6Q9H6R4 1146 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 TDRD3Q9H7E2 651 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 MBNL3Q9NUK0 354 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 LMCD1Q9NZU5 365 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 ADAMTS6Q9UKP5 1117 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms