RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LYPLA2O95372 231 aa19.51■□□□□ 0.71
TPM1-214ENST00000558544 ZRSR1Q15695 479 aaKnown RBP19.51■□□□□ 0.71
TPM1-214ENST00000558544 CABP7Q86V35 215 aa19.51■□□□□ 0.71
TPM1-214ENST00000558544 KCNG4Q8TDN1 519 aa19.51■□□□□ 0.71
TPM1-214ENST00000558544 PIGOQ8TEQ8 1089 aa19.51■□□□□ 0.71
TPM1-214ENST00000558544 NIFKQ9BYG3 293 aaKnown RBP19.51■□□□□ 0.71
TPM1-214ENST00000558544 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
TPM1-214ENST00000558544 MBLAC1A4D2B0 266 aaPredicted RBP19.5■□□□□ 0.71
TPM1-214ENST00000558544 NPEPPSP55786 919 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 RUFY4Q6ZNE9 571 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 SERINC5Q86VE9 423 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 LEO1Q8WVC0 666 aaPredicted RBP19.5■□□□□ 0.71
TPM1-214ENST00000558544 WNT8BQ93098 351 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 DDX19AQ9NUU7 478 aaKnown RBP19.5■□□□□ 0.71
TPM1-214ENST00000558544 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 ZMYND8Q9ULU4 1186 aaPredicted RBP19.5■□□□□ 0.71
TPM1-214ENST00000558544 KIAA1024Q9UPX6 916 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 KDM3AQ9Y4C1 1321 aa19.5■□□□□ 0.71
TPM1-214ENST00000558544 TRIM43BA6NCK2 446 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 C22orf31O95567 290 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 SYN1P17600 705 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 MUTP22033 750 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 KLRC1P26715 233 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 UBA7P41226 1012 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 ME1P48163 572 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 PTK7Q13308 1070 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 TARBP2Q15633 366 aaKnown RBP19.49■□□□□ 0.71
TPM1-214ENST00000558544 XKR9Q5GH70 373 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 OTUD6AQ7L8S5 288 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 ZNF579Q8NAF0 562 aaKnown RBP19.49■□□□□ 0.71
TPM1-214ENST00000558544 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
TPM1-214ENST00000558544 SYMPKQ92797 1274 aaKnown RBP19.49■□□□□ 0.71
TPM1-214ENST00000558544 TRIM43Q96BQ3 446 aaPredicted RBP19.49■□□□□ 0.71
TPM1-214ENST00000558544 EPSTI1Q96J88 318 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 CEP170P1Q96L14 293 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 CYP26B1Q9NR63 512 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 PRKAG2Q9UGJ0 569 aa19.49■□□□□ 0.71
TPM1-214ENST00000558544 KIAA0355O15063 1070 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 GRB10Q13322 594 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 CCDC43Q96MW1 224 aaKnown RBP19.48■□□□□ 0.71
TPM1-214ENST00000558544 PNMA5Q96PV4 448 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 NACC1Q96RE7 527 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 CEP89Q96ST8 783 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 PLIN2Q99541 437 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 NOC4LQ9BVI4 516 aaKnown RBP19.48■□□□□ 0.71
TPM1-214ENST00000558544 HIPK3Q9H422 1215 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 GDPD2Q9HCC8 539 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 ANKEF1Q9NU02 776 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 PCDHA7Q9UN72 937 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 UMODL1Q5DID0 1318 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 CEP290O15078 2479 aa19.48■□□□□ 0.71
TPM1-214ENST00000558544 MYH11P35749 1972 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 CUTAO60888 179 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 TBC1D8BQ0IIM8 1120 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 KARSQ15046 597 aaKnown RBP19.47■□□□□ 0.71
TPM1-214ENST00000558544 HYIQ5T013 277 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 CALML4Q96GE6 196 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 SCAND2PQ9GZW5 306 aaPredicted RBP19.47■□□□□ 0.71
TPM1-214ENST00000558544 FAM49AQ9H0Q0 323 aaPredicted RBP19.47■□□□□ 0.71
TPM1-214ENST00000558544 BMP2KQ9NSY1 1161 aaPredicted RBP19.47■□□□□ 0.71
TPM1-214ENST00000558544 PCDHA2Q9Y5H9 948 aa19.47■□□□□ 0.71
TPM1-214ENST00000558544 E9PMD0 336 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 RAG1P15918 1043 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 ITGB8P26012 769 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 RARRES1P49788 294 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 TRIM71Q2Q1W2 868 aaKnown RBP19.46■□□□□ 0.71
TPM1-214ENST00000558544 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 AXDND1Q5T1B0 1012 aaPredicted RBP19.46■□□□□ 0.71
TPM1-214ENST00000558544 TAF2Q6P1X5 1199 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 KCNK18Q7Z418 384 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 LRRC71Q8N4P6 559 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 CCDC155Q8N6L0 562 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 METTL13Q8N6R0 699 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 CAGE1Q8TC20 777 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 DNAJB3Q8WWF6 145 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 CCSER1Q9C0I3 900 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 NT5C3AQ9H0P0 336 aa19.46■□□□□ 0.71
TPM1-214ENST00000558544 SMIM35A0A1B0GVV1 85 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 MAGEB2O15479 319 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 SLC26A4O43511 780 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
TPM1-214ENST00000558544 CYP2C18P33260 490 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 TXLNAP40222 546 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 THPOP40225 353 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 POLGP54098 1239 aaPredicted RBP19.45■□□□□ 0.7
TPM1-214ENST00000558544 BFSP2Q13515 415 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 DBR1Q9UK59 544 aaKnown RBP19.45■□□□□ 0.7
TPM1-214ENST00000558544 DNM3Q9UQ16 869 aa19.45■□□□□ 0.7
TPM1-214ENST00000558544 MAFO75444 373 aaPredicted RBP19.44■□□□□ 0.7
TPM1-214ENST00000558544 TIMP1P01033 207 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 CTSHP09668 335 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 CKBP12277 381 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms