RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 KIF28PB7ZC32 967 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 GAS2O43903 313 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 CTSHP09668 335 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 MUTP22033 750 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 C4orf19Q8IY42 314 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 MTMR9Q96QG7 549 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 FAM49AQ9H0Q0 323 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 TRPV2Q9Y5S1 764 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 KDM3AQ9Y4C1 1321 aa17.7■□□□□ 0.42
RABGGTA-205ENST00000558534 DDX11L8A8MPP1 907 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 ATP4AP20648 1035 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 PRPHP41219 470 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 ZNF174Q15697 407 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 RUFY4Q6ZNE9 571 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 METTL13Q8N6R0 699 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 BANK1Q8NDB2 785 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 GJA10Q969M2 543 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 LXNQ9BS40 222 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 FTHL17Q9BXU8 183 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 MICAL3Q7RTP6 2002 aa17.69■□□□□ 0.42
RABGGTA-205ENST00000558534 TET1Q8NFU7 2136 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 ZNF862O60290 1169 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 NBNO60934 754 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 C22orf31O95567 290 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 RFC5P40937 340 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 SPIRE1Q08AE8 756 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 PLEKHG4Q58EX7 1191 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 TRAF7Q6Q0C0 670 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 WNT8BQ93098 351 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 IFIH1Q9BYX4 1025 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 TUFT1Q9NNX1 390 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
RABGGTA-205ENST00000558534 EML1O00423 815 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 LYPLA2O95372 231 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 AMHP03971 560 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 XRCC6P12956 609 aaKnown RBP eCLIP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 YWHABP31946 246 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 FXR2P51116 673 aaKnown RBP eCLIP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 PDIA5Q14554 519 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 UGCGQ16739 394 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 MTERF2Q49AM1 385 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 TRAPPC12Q8WVT3 735 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 EIF2AK1Q9BQI3 630 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 CELF4Q9BZC1 486 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 AKT3Q9Y243 479 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 ARID2Q68CP9 1835 aa17.67■□□□□ 0.42
RABGGTA-205ENST00000558534 ZBTB42B2RXF5 422 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 MGAT3Q09327 533 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 PTGDRQ13258 359 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 ARL6IP4Q66PJ3 421 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 DTHD1Q6ZMT9 781 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 KCTD17Q8N5Z5 321 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 TCP11Q8WWU5 503 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 DYDC2Q96IM9 177 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 CEP170P1Q96L14 293 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 POLR3CQ9BUI4 534 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 CYP26B1Q9NR63 512 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 ANKEF1Q9NU02 776 aa17.66■□□□□ 0.42
RABGGTA-205ENST00000558534 SIP14410 1827 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 MAFO75444 373 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 CHRNA1P02708 482 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 TECP42680 631 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 CRYBB1P53674 252 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 PAK2Q13177 524 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 MBTPS1Q14703 1052 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 TARBP2Q15633 366 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 FBXO47Q5MNV8 452 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 KIAA0319LQ8IZA0 1049 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 DBF4BQ8NFT6 615 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 NACC1Q96RE7 527 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 HSD17B14Q9BPX1 270 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 INO80BQ9C086 356 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 TMEM60Q9H2L4 133 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 LRWD1Q9UFC0 647 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
RABGGTA-205ENST00000558534 GPR182O15218 404 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 SLITRK3O94933 977 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 GHRP10912 638 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 RPA1P27694 616 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 CYP4A11Q02928 519 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 BECN1Q14457 450 aa17.64■□□□□ 0.41
RABGGTA-205ENST00000558534 XKR9Q5GH70 373 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms