RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 NUAK1O60285 661 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 GCP02774 474 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 JAG1P78504 1218 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
RTF1-204ENST00000558117 LONRF2Q1L5Z9 754 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 ZNF385BQ569K4 471 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 CEP68Q76N32 757 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 NLRP10Q86W26 655 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 THAP3Q8WTV1 239 aaPredicted RBP8.2□□□□□ -1.1
RTF1-204ENST00000558117 KISS1RQ969F8 398 aaPredicted RBP8.2□□□□□ -1.1
RTF1-204ENST00000558117 TMEM169Q96HH4 297 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 IPO9Q96P70 1041 aaKnown RBP8.2□□□□□ -1.1
RTF1-204ENST00000558117 PHF20Q9BVI0 1012 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 ADGRF5Q8IZF2 1346 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 VPS8Q8N3P4 1428 aa8.2□□□□□ -1.1
RTF1-204ENST00000558117 A0A0G2JLW4 131 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 FPR2P25090 351 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 SLC9A5Q14940 896 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 C2orf27AQ580R0 203 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 DCAF4Q8WV16 495 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 TSPAN17Q96FV3 270 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
RTF1-204ENST00000558117 TRAF6Q9Y4K3 522 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 KCTD3Q9Y597 815 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 PTCH2Q9Y6C5 1203 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 PASKQ96RG2 1323 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 COL18A1P39060 1754 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 SPATA31E1Q6ZUB1 1445 aa8.19□□□□□ -1.1
RTF1-204ENST00000558117 QRICH2Q9H0J4 1663 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 C6orf222P0C671 652 aaPredicted RBP8.18□□□□□ -1.1
RTF1-204ENST00000558117 PI3P19957 117 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 NCKAP1LP55160 1127 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 TGFB2P61812 414 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 LSAMPQ13449 338 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 SAFB2Q14151 953 aaKnown RBP eCLIP8.18□□□□□ -1.1
RTF1-204ENST00000558117 GPR27Q9NS67 375 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 PCDHA5Q9Y5H7 936 aa8.18□□□□□ -1.1
RTF1-204ENST00000558117 KIAA1551Q9HCM1 1747 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 H7BY64 318 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
RTF1-204ENST00000558117 IGSF3O75054 1194 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 CFPP27918 469 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
RTF1-204ENST00000558117 SQSTM1Q13501 440 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 STYK1Q6J9G0 422 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 SEC14L1Q92503 715 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 PRAM1Q96QH2 718 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 RNF38Q9H0F5 515 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 CLDND1Q9NY35 253 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
RTF1-204ENST00000558117 SIT1Q9Y3P8 196 aa8.17□□□□□ -1.1
RTF1-204ENST00000558117 WDR33Q9C0J8 1336 aaKnown RBP8.17□□□□□ -1.1
RTF1-204ENST00000558117 ABCC6O95255 1503 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 NCAM1P13591 858 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 SSPNQ14714 243 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
RTF1-204ENST00000558117 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 IGDCC3Q8IVU1 814 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 Q8N1Y9 231 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 CCNL1Q9UK58 526 aaPredicted RBP8.16□□□□□ -1.1
RTF1-204ENST00000558117 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 X6R8D5 127 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 COL6A3P12111 3177 aa8.16□□□□□ -1.1
RTF1-204ENST00000558117 PIK3C2AO00443 1686 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 ADAMTS7Q9UKP4 1686 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
RTF1-204ENST00000558117 DPEP1P16444 411 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 SLC6A11P48066 632 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 FZD5Q13467 585 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 ZC3H12BQ5HYM0 836 aaKnown RBP8.15□□□□□ -1.1
RTF1-204ENST00000558117 AMIGO3Q86WK7 504 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 TMEM151BQ8IW70 566 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 ZSWIM2Q8NEG5 633 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
RTF1-204ENST00000558117 IRF2BPLQ9H1B7 796 aa8.15□□□□□ -1.1
RTF1-204ENST00000558117 KDM6AO15550 1401 aaPredicted RBP8.14□□□□□ -1.11
RTF1-204ENST00000558117 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 IRS2Q9Y4H2 1338 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 DGKIO75912 1065 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 KCNA3P22001 575 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 GPR85P60893 370 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 KRTAP19-4Q3LI73 84 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 CNKSR3Q6P9H4 555 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 LBX2Q6XYB7 198 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 CILP2Q8IUL8 1156 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 IFNL3Q8IZI9 196 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 NLGN1Q8N2Q7 840 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 PTPRN2Q92932 1015 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 ZFYVE21Q9BQ24 234 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 JAM3Q9BX67 310 aa8.14□□□□□ -1.11
RTF1-204ENST00000558117 BCAS3Q9H6U6 928 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms