RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 LRRC8DQ7L1W4 858 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 METTL13Q8N6R0 699 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
USP3-205ENST00000557884 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
USP3-205ENST00000557884 RAB34Q9BZG1 259 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 UBE2OQ9C0C9 1292 aaKnown RBP16.05■□□□□ 0.16
USP3-205ENST00000557884 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
USP3-205ENST00000557884 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 PCDHA2Q9Y5H9 948 aa16.05■□□□□ 0.16
USP3-205ENST00000557884 CLCN3P51790 818 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 GRIN1Q05586 938 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 RBL2Q08999 1139 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.164e-6■■■□□ 16
USP3-205ENST00000557884 PDIA5Q14554 519 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 TARBP2Q15633 366 aaKnown RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 TRAF7Q6Q0C0 670 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 DEFB128Q7Z7B8 93 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 SNX29Q8TEQ0 813 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 CEP170P1Q96L14 293 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 POLR3CQ9BUI4 534 aaPredicted RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 CYP26B1Q9NR63 512 aa16.04■□□□□ 0.16
USP3-205ENST00000557884 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
USP3-205ENST00000557884 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 STK38Q15208 465 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 ECM1Q16610 540 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 HAUS3Q68CZ6 603 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 RSPH3Q86UC2 560 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
USP3-205ENST00000557884 PPP1R16BQ96T49 567 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 SUGCTQ9HAC7 445 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 IL23AQ9NPF7 189 aa16.03■□□□□ 0.16
USP3-205ENST00000557884 COLQQ9Y215 455 aaPredicted RBP16.03■□□□□ 0.16
USP3-205ENST00000557884 SMIM35A0A1B0GVV1 85 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 MAGEB2O15479 319 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 LYPLA2O95372 231 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 RPA1P27694 616 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 EFCAB12Q6NXP0 572 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 KIAA0319LQ8IZA0 1049 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 CEP89Q96ST8 783 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 MMTAG2Q9BU76 263 aaKnown RBP16.02■□□□□ 0.16
USP3-205ENST00000557884 OSBPL7Q9BZF2 842 aa16.02■□□□□ 0.16
USP3-205ENST00000557884 NBNO60934 754 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 CAND2O75155 1236 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 CHRNA1P02708 482 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 VTNP04004 478 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 POLGP54098 1239 aaPredicted RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 MRPS6P82932 125 aaKnown RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 DRP2Q13474 957 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 GPNMBQ14956 572 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 SLC39A14Q15043 492 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 PLIN2Q99541 437 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 PRO3102Q9H379 93 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 ANKEF1Q9NU02 776 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
USP3-205ENST00000557884 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 AKT3Q9Y243 479 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 CDY2AQ9Y6F7 541 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 LTBP2Q14767 1821 aa16.01■□□□□ 0.15
USP3-205ENST00000557884 MAFO75444 373 aaPredicted RBP16■□□□□ 0.15
USP3-205ENST00000557884 BMP8BP34820 402 aa16■□□□□ 0.15
USP3-205ENST00000557884 RFC2P35250 354 aa16■□□□□ 0.15
USP3-205ENST00000557884 RARRES1P49788 294 aa16■□□□□ 0.15
USP3-205ENST00000557884 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
USP3-205ENST00000557884 MGAT3Q09327 533 aa16■□□□□ 0.15
USP3-205ENST00000557884 TMEM240Q5SV17 173 aa16■□□□□ 0.15
USP3-205ENST00000557884 ZNF365Q70YC5 407 aa16■□□□□ 0.15
USP3-205ENST00000557884 CABP7Q86V35 215 aa16■□□□□ 0.15
USP3-205ENST00000557884 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
USP3-205ENST00000557884 LINC00301Q8NCQ3 95 aa16■□□□□ 0.15
USP3-205ENST00000557884 ZNF668Q96K58 619 aaPredicted RBP16■□□□□ 0.15
USP3-205ENST00000557884 NACC1Q96RE7 527 aa16■□□□□ 0.15
USP3-205ENST00000557884 MAP7D2Q96T17 732 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms