RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PPM1NQ8N819 430 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 C7orf31Q8N865 590 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 MARCH10Q8NA82 808 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 RTF1Q92541 710 aaKnown RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 DLG3Q92796 817 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 FERMT2Q96AC1 680 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 EAF2Q96CJ1 260 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 MAML3Q96JK9 1138 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 CGRRF1Q99675 332 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 ANO3Q9BYT9 981 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 GPR62Q9BZJ7 368 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 LRRC27Q9C0I9 530 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 WNT8AQ9H1J5 351 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 EPB41L1Q9H4G0 881 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 LGR6Q9HBX8 967 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 KMT5AQ9NQR1 393 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 STARD7Q9NQZ5 370 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 KCNH7Q9NS40 1196 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 RRN3Q9NYV6 651 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 CDC23Q9UJX2 597 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 SRPK3Q9UPE1 567 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 STXBP5LQ9Y2K9 1186 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 COA3Q9Y2R0 106 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 NUB1Q9Y5A7 615 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 SNX13Q9Y5W8 968 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 A0A087WV62 115 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 C7orf72A4D263 438 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 J3KRW8 73 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 RNF225M0QZC1 329 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 M0R3H8 397 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 KPNA5O15131 536 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 GFRA3O60609 400 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 ALDH2P05091 517 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 NFICP08651 508 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CLEC2LP0C7M8 214 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PIK3CBP42338 1070 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PREPP48147 710 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CASP5P51878 434 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 MAPK10P53779 464 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 BCAR1P56945 870 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 GPSM2P81274 684 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CDK5R2Q13319 367 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 COL9A3Q14050 684 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 TMEM132BQ14DG7 1078 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PAN2Q504Q3 1202 aaKnown RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 FAM209BQ5JX69 171 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 FSTL4Q6MZW2 842 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CDPF1Q6NVV7 123 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PGBD2Q6P3X8 592 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CCDC62Q6P9F0 684 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CEP68Q76N32 757 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 OTOP3Q7RTS5 596 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PHYKPLQ8IUZ5 450 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 LINC00116Q8NCU8 138 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 PHKBQ93100 1093 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 KIAA1191Q96A73 305 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 ARL8AQ96BM9 186 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 ZNF496Q96IT1 587 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 EIF2AK1Q9BQI3 630 aaKnown RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 LRFN3Q9BTN0 628 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 DUSP23Q9BVJ7 150 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CDADC1Q9BWV3 514 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CEP41Q9BYV8 373 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 DCP1AQ9NPI6 582 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 AP5S1Q9NUS5 200 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 BTG4Q9NY30 223 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 GMPR2Q9P2T1 348 aaKnown RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 EVLQ9UI08 416 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 TCFL5Q9UL49 500 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 MAGED2Q9UNF1 606 aaPredicted RBP4.54□□□□□ -1.68
TDP1-217ENST00000557782 CORO2BQ9UQ03 480 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 GPR52Q9Y2T5 361 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 ATP23Q9Y6H3 246 aa4.54□□□□□ -1.68
TDP1-217ENST00000557782 ST20-MTHFSA0A0A6YYL1 179 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 TCRBV5S4A2TA0A5A2 114 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 WTIPA6NIX2 430 aaPredicted RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 KRIT1O00522 736 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 ADAMTS3O15072 1205 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 SNX2O60749 519 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 DGKIO75912 1065 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 TMEM253P0C7T8 217 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 ZNF865P0CJ78 1059 aaPredicted RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 COL6A2P12110 1019 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 MYF5P13349 255 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 GJA4P35212 333 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 STT3AP46977 705 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 EIF5P55010 431 aaKnown RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 TNK2Q07912 1038 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 DUSP4Q13115 394 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 MOGSQ13724 837 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 STARD3Q14849 445 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 MUM1Q2TAK8 710 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 HSF5Q4G112 596 aaPredicted RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 CCDC157Q569K6 752 aa4.53□□□□□ -1.68
TDP1-217ENST00000557782 HABP4Q5JVS0 413 aaKnown RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 INTS11Q5TA45 600 aaKnown RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 C1orf229Q6ZS94 237 aaPredicted RBP4.53□□□□□ -1.68
TDP1-217ENST00000557782 NLRP10Q86W26 655 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms