RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CEP55Q53EZ4 464 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 PLPPR4Q7Z2D5 763 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 VN1R2Q8NFZ6 395 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-210ENST00000557431 ADAM2Q99965 735 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-210ENST00000557431 TRIOO75962 3097 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 PIEZO1Q92508 2521 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ZDBF2Q9HCK1 2354 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 FAM86B1E9PN63 330 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ATG7O95352 703 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 VTNP04004 478 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 FGFR1P11362 822 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ATP4AP20648 1035 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 SARSP49591 514 aaKnown RBP16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ERVFC1P60507 584 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
SLIRP-210ENST00000557431 ABHD15Q6UXT9 468 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 SMRP1Q8NCR6 262 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 MICAL1Q8TDZ2 1067 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 OSMRQ99650 979 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
SLIRP-210ENST00000557431 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
SLIRP-210ENST00000557431 USP15Q9Y4E8 981 aaPredicted RBP16.05■□□□□ 0.16
SLIRP-210ENST00000557431 SQORQ9Y6N5 450 aa16.05■□□□□ 0.16
SLIRP-210ENST00000557431 IGKV6D-21A0A0A0MT36 114 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 GOLGA8AA7E2F4 631 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 MEIS1O00470 390 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 CPA1P15085 419 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 SP100P23497 879 aaPredicted RBP16.04■□□□□ 0.16
SLIRP-210ENST00000557431 SREBF1P36956 1147 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
SLIRP-210ENST00000557431 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 PDXDC2PQ6P474 469 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 FAM228AQ86W67 206 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 ATP8B4Q8TF62 1192 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
SLIRP-210ENST00000557431 ZNF302Q9NR11 478 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 FAM217BQ9NTX9 383 aaPredicted RBP16.04■□□□□ 0.16
SLIRP-210ENST00000557431 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 C2orf16Q68DN1 1984 aa16.04■□□□□ 0.16
SLIRP-210ENST00000557431 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 DENND3A2RUS2 1198 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 DHX15O43143 795 aaKnown RBP16.03■□□□□ 0.16
SLIRP-210ENST00000557431 ZBTB43O43298 467 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 HBP1O60381 514 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 EYA4O95677 639 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 PBX3P40426 434 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 IER5LQ5T953 404 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 COLGALT1Q8NBJ5 622 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 PRSS33Q8NF86 280 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 RASGRP4Q8TDF6 673 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 TLE6Q9H808 572 aa16.03■□□□□ 0.16
SLIRP-210ENST00000557431 TYW1Q9NV66 732 aaKnown RBP16.03■□□□□ 0.16
SLIRP-210ENST00000557431 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
SLIRP-210ENST00000557431 PLXNA3P51805 1871 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 IGLV3-22A0A075B6J6 115 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 C9IYK1 514 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 FGF18O76093 207 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 CLCN3P51790 818 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.16
SLIRP-210ENST00000557431 NAALADL2Q58DX5 795 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 PPP1R18Q6NYC8 613 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 LLGL2Q6P1M3 1020 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 THNSL1Q8IYQ7 743 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 METTL13Q8N6R0 699 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 EDAQ92838 391 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 CWH43Q9H720 699 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 TLR9Q9NR96 1032 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 BARHL2Q9NY43 387 aa16.02■□□□□ 0.16
SLIRP-210ENST00000557431 TMEM221A6NGB7 291 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 LOC730098B7Z3J9 87 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 M0R296 226 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 C22orf31O95567 290 aa16.01■□□□□ 0.15
SLIRP-210ENST00000557431 FOSP01100 380 aaPredicted RBP16.01■□□□□ 0.15
SLIRP-210ENST00000557431 RPLP2P05387 115 aaKnown RBP16.01■□□□□ 0.15
SLIRP-210ENST00000557431 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
SLIRP-210ENST00000557431 COASYQ13057 564 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms