RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CLP1Q92989 425 aaKnown RBP16.05■□□□□ 0.16
SNX6-210ENST00000557341 LENG9Q96B70 501 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 ZNF689Q96CS4 500 aaPredicted RBP16.05■□□□□ 0.16
SNX6-210ENST00000557341 TM6SF1Q9BZW5 370 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
SNX6-210ENST00000557341 WDR64B1ANS9 1081 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 DEXIO95424 95 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 C22orf31O95567 290 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 RB1P06400 928 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 ATP4AP20648 1035 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 NLRP5P59047 1200 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 FAM167AQ96KS9 214 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 UPF3BQ9BZI7 483 aaKnown RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
SNX6-210ENST00000557341 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
SNX6-210ENST00000557341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
SNX6-210ENST00000557341 KCNA5P22460 613 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 BMPR1AP36894 532 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 USP11P51784 963 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
SNX6-210ENST00000557341 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 ODR4Q5SWX8 454 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 CMTR2Q8IYT2 770 aaKnown RBP16.03■□□□□ 0.16
SNX6-210ENST00000557341 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
SNX6-210ENST00000557341 LMAN2LQ9H0V9 348 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 PCDHA4Q9UN74 947 aa16.03■□□□□ 0.16
SNX6-210ENST00000557341 MSH4O15457 936 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 GAS7O60861 476 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 SFNP31947 248 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 LEXMQ3ZCV2 418 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 TCEAL5Q5H9L2 206 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 TRMT1LQ7Z2T5 733 aaKnown RBP16.02■□□□□ 0.16
SNX6-210ENST00000557341 RTN4RL1Q86UN2 441 aaPredicted RBP16.02■□□□□ 0.16
SNX6-210ENST00000557341 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 RIT2Q99578 217 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 TEKT3Q9BXF9 490 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 ERVK-5Q9HDB9 667 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
SNX6-210ENST00000557341 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 MMP1P03956 469 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 OATP04181 439 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 JAK3P52333 1124 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 STK3Q13188 491 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 PAN2Q504Q3 1202 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 METTL13Q8N6R0 699 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 SLC5A5Q92911 643 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 PABPC5Q96DU9 382 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 OSMRQ99650 979 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 PLVAPQ9BX97 442 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 DISC1Q9NRI5 854 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 PDRG1Q9NUG6 133 aa16.01■□□□□ 0.15
SNX6-210ENST00000557341 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 NOC2LQ9Y3T9 749 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 MRPL42Q9Y6G3 142 aaKnown RBP16.01■□□□□ 0.15
SNX6-210ENST00000557341 GPR182O15218 404 aa16■□□□□ 0.15
SNX6-210ENST00000557341 GRM6O15303 877 aa16■□□□□ 0.15
SNX6-210ENST00000557341 MAGEB2O15479 319 aa16■□□□□ 0.15
SNX6-210ENST00000557341 CHMP2AO43633 222 aa16■□□□□ 0.15
SNX6-210ENST00000557341 EDIL3O43854 480 aa16■□□□□ 0.15
SNX6-210ENST00000557341 CDKL5O76039 1030 aa16■□□□□ 0.15
SNX6-210ENST00000557341 VTNP04004 478 aa16■□□□□ 0.15
SNX6-210ENST00000557341 CRYBB1P53674 252 aaPredicted RBP16■□□□□ 0.15
SNX6-210ENST00000557341 PRKCEQ02156 737 aa16■□□□□ 0.15
SNX6-210ENST00000557341 KIZQ2M2Z5 673 aa16■□□□□ 0.15
SNX6-210ENST00000557341 GALNT17Q6IS24 598 aa16■□□□□ 0.15
SNX6-210ENST00000557341 P2RX5Q93086 422 aa16■□□□□ 0.15
SNX6-210ENST00000557341 MAP7D2Q96T17 732 aa16■□□□□ 0.15
SNX6-210ENST00000557341 CDHR5Q9HBB8 845 aa16■□□□□ 0.15
SNX6-210ENST00000557341 C1orf112Q9NSG2 853 aa16■□□□□ 0.15
SNX6-210ENST00000557341 M0R2N6 131 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 ZNF862O60290 1169 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 MGEA5O60502 916 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 TDP2O95551 362 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 IBSPP21815 317 aaPredicted RBP15.99■□□□□ 0.15
SNX6-210ENST00000557341 TMOD1P28289 359 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 CLCN3P51790 818 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 COL19A1Q14993 1142 aa15.99■□□□□ 0.15
SNX6-210ENST00000557341 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
SNX6-210ENST00000557341 Q4G0T1 1027 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms