RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-227ENST00000557307 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
SYNE2-227ENST00000557307 ERVK-5Q9HDB9 667 aa12.38□□□□□ -0.43
SYNE2-227ENST00000557307 KCNJ14Q9UNX9 436 aa12.38□□□□□ -0.43
SYNE2-227ENST00000557307 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
SYNE2-227ENST00000557307 MAFBQ9Y5Q3 323 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-227ENST00000557307 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-227ENST00000557307 HBP1O60381 514 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 SETQ01105 290 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-227ENST00000557307 KRT76Q01546 638 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 SCRN1Q12765 414 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 PAK2Q13177 524 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 CAMK1Q14012 370 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 KIZQ2M2Z5 673 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 FAM160B1Q5W0V3 765 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 ZNF746Q6NUN9 644 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-227ENST00000557307 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 TEX2Q8IWB9 1127 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 LRRC71Q8N4P6 559 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 LINC01465Q8N7H1 131 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-227ENST00000557307 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-227ENST00000557307 OSMRQ99650 979 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 SH2D3AQ9BRG2 576 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 COG5Q9UP83 839 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 PCDHGC5Q9Y5F6 944 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 COL1A2P08123 1366 aa12.37□□□□□ -0.43
SYNE2-227ENST00000557307 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 H3BQ06 376 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 SLC37A4O43826 429 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 GPR32O75388 356 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 KCNA5P22460 613 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 GNA11P29992 359 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 NLRP5P59047 1200 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 NFX1Q12986 1120 aaKnown RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 DRP2Q13474 957 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 EARS2Q5JPH6 523 aaKnown RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 IER5Q5VY09 327 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 CLP1Q92989 425 aaKnown RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 ALG13Q9NP73 1137 aaKnown RBP12.36□□□□□ -0.43
SYNE2-227ENST00000557307 TBC1D22BQ9NU19 505 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 PCDHA4Q9UN74 947 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 TRIOO75962 3097 aa12.36□□□□□ -0.43
SYNE2-227ENST00000557307 C5orf67F2Z3F1 127 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 LINC01565O15544 149 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 PSMD10O75832 226 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 STBD1O95210 358 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 DEXIO95424 95 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 PSAPP07602 524 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 FGFR4P22455 802 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 IRS1P35568 1242 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 BMPR1AP36894 532 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 SLC26A2P50443 739 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 PRKCEQ02156 737 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-227ENST00000557307 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
SYNE2-227ENST00000557307 FAM102BQ5T8I3 360 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 BANK1Q8NDB2 785 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-227ENST00000557307 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-227ENST00000557307 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
SYNE2-227ENST00000557307 M0QZ92 97 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 SEC24BO95487 1268 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 OATP04181 439 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 LTBRP36941 435 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 INF2Q27J81 1249 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 AAK1Q2M2I8 961 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-227ENST00000557307 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
SYNE2-227ENST00000557307 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms