RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 UBE3AQ05086 875 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 MARCH8Q5T0T0 291 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 PLPP4Q5VZY2 271 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 THNSL1Q8IYQ7 743 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 MTMR8Q96EF0 704 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 FTHL17Q9BXU8 183 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 MFSD1Q9H3U5 465 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 TMEM260Q9NX78 707 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 PADI3Q9ULW8 664 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 NR2E1Q9Y466 385 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
SYNE2-224ENST00000557024 DMDP11532 3685 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 C2CD4DB7Z1M9 353 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 ZNF213O14771 459 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 FSCN2O14926 492 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 STAM2O75886 525 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 ASGR2P07307 311 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 FECHP22830 423 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 PAK2Q13177 524 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 KCNC3Q14003 757 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 SLC35G1Q2M3R5 365 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 TMEM184AQ6ZMB5 413 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 PIGSQ96S52 555 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 TMX1Q9H3N1 280 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 AAASQ9NRG9 546 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 SALL3Q9BXA9 1300 aa10.72□□□□□ -0.69
SYNE2-224ENST00000557024 TBKBP1A7MCY6 615 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 SARSP49591 514 aaKnown RBP10.71□□□□□ -0.69
SYNE2-224ENST00000557024 FRMPD4Q14CM0 1322 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 TMEM266Q2M3C6 531 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 IER5Q5VY09 327 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 PDE12Q6L8Q7 609 aaKnown RBP10.71□□□□□ -0.69
SYNE2-224ENST00000557024 COLGALT1Q8NBJ5 622 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 GLG1Q92896 1179 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 RMDN1Q96DB5 314 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 TCF25Q9BQ70 676 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 POMKQ9H5K3 350 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 ERAP1Q9NZ08 941 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 ZSWIM5Q9P217 1185 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 MAD2L2Q9UI95 211 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 DMXL1Q9Y485 3027 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 PCDHB7Q9Y5E2 793 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 TRPV2Q9Y5S1 764 aa10.71□□□□□ -0.69
SYNE2-224ENST00000557024 TTC3P53804 2025 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 ZNF292O60281 2723 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 IGSF9BQ9UPX0 1349 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 M0QZ92 97 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 KRT37O76014 449 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 ARP10275 920 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 HOXB8P17481 243 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-224ENST00000557024 CLCN5P51795 746 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
SYNE2-224ENST00000557024 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 DGLUCYQ7Z3D6 616 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 FLCNQ8NFG4 579 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 SENP7Q9BQF6 1050 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 TYW1Q9NV66 732 aaKnown RBP10.7□□□□□ -0.7
SYNE2-224ENST00000557024 PKD2L1Q9P0L9 805 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 SQORQ9Y6N5 450 aa10.7□□□□□ -0.7
SYNE2-224ENST00000557024 GSTTP1A0A1W2PQM5 241 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 PI15O43692 258 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 MGEA5O60502 916 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 ATP9AO75110 1047 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 WEE2P0C1S8 567 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 INSRRP14616 1297 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 TRAF1Q13077 416 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 PCNX4Q63HM2 1172 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 CWF19L1Q69YN2 538 aaKnown RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 TRAPPC12Q8WVT3 735 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 PIBF1Q8WXW3 757 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 SEPT1Q8WYJ6 367 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 CELF4Q9BZC1 486 aaKnown RBP10.69□□□□□ -0.7
SYNE2-224ENST00000557024 ADAM7Q9H2U9 754 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 SMARCAD1Q9H4L7 1026 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 LIMD1Q9UGP4 676 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 PCDHGA4Q9Y5G9 962 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
SYNE2-224ENST00000557024 KIAA1671Q9BY89 1806 aa10.68□□□□□ -0.7
SYNE2-224ENST00000557024 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
SYNE2-224ENST00000557024 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
SYNE2-224ENST00000557024 DENND3A2RUS2 1198 aa10.68□□□□□ -0.7
SYNE2-224ENST00000557024 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
SYNE2-224ENST00000557024 RPLP2P05387 115 aaKnown RBP10.68□□□□□ -0.7
SYNE2-224ENST00000557024 FGFR1P11362 822 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms