RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TMEM87AQ8NBN3 555 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SPIRE2Q8WWL2 714 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SSH1Q8WYL5 1049 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SHDQ96IW2 340 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 MEIS3Q99687 375 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 FTHL17Q9BXU8 183 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 API5Q9BZZ5 524 aaKnown RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 CCDC8Q9H0W5 538 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ARMT1Q9H993 441 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 DLGAP2Q9P1A6 1054 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SIP14410 1827 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 MYH13Q9UKX3 1938 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SCN5AQ14524 2016 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 KRBA1A5PL33 1030 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 SRRM3A6NNA2 597 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 NFIBO00712 420 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 TREHO43280 583 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 RETP07949 1114 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 ZNF286BP0CG31 522 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 GHRP10912 638 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 MCCP23508 829 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 GCGRP47871 477 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 SNAP25P60880 206 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 SPEM2Q0P670 501 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 PAN2Q504Q3 1202 aaKnown RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 RARS2Q5T160 578 aaKnown RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 MYSM1Q5VVJ2 828 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 CCDC149Q6ZUS6 474 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 RASGRP2Q7LDG7 609 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 MRPS27Q92552 414 aaKnown RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 CEP95Q96GE4 821 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 FAM126AQ9BYI3 521 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 MAF1Q9H063 256 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 PRKRIP1Q9H875 184 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 PARD6AQ9NPB6 346 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 ENTPD7Q9NQZ7 604 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 DZANK1Q9NVP4 752 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 SPATA6Q9NWH7 488 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 ARPP21Q9UBL0 812 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 DBNLQ9UJU6 430 aaKnown RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 PRR12Q9ULL5 1215 aa6.76□□□□□ -1.33
ATXN3-245ENST00000556958 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.76□□□□□ -1.33
ATXN3-245ENST00000556958 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 H3BRB1 525 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 LILRB5O75023 590 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 MBD4O95243 580 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 GNAI2P04899 355 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 SRFP11831 508 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 MAGEA9P43362 315 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 NRLP54845 237 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 RPS6P62753 249 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 PLCB3Q01970 1234 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 DDX10Q13206 875 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 CSRP2Q16527 193 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 ALDH1L2Q3SY69 923 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 LAIR1Q6GTX8 287 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 PRR23BQ6ZRT6 265 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 MAML2Q8IZL2 1156 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 MRPL43Q8N983 215 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 NSUN6Q8TEA1 469 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 SPATA33Q96N06 139 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 OSBPL7Q9BZF2 842 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 RNPEPQ9H4A4 650 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 TUT1Q9H6E5 874 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
ATXN3-245ENST00000556958 CA14Q9ULX7 337 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 HCFC2Q9Y5Z7 792 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 SLC4A4Q9Y6R1 1079 aa6.75□□□□□ -1.33
ATXN3-245ENST00000556958 ZNFX1Q9P2E3 1918 aaKnown RBP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 TCRBV5S4A2TA0A5A2 114 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 HIDE1A8MVS5 230 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SURF6O75683 361 aaKnown RBP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 CHRNA1P02708 482 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 RPLP2P05387 115 aaKnown RBP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 WEE2P0C1S8 567 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 TSPY3P0CV98 308 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 TSPY8P0CW00 308 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SCG2P13521 617 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 LAG3P18627 525 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 HOXC8P31273 242 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms