RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 DBF4BQ8NFT6 615 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 SEPT8Q92599 483 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 NIFKQ9BYG3 293 aaKnown RBP25.68■■□□□ 1.7
TDP1-216ENST00000556867 TTC12Q9H892 705 aaPredicted RBP25.68■■□□□ 1.7
TDP1-216ENST00000556867 TRPV2Q9Y5S1 764 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 LOXHD1Q8IVV2 1947 aa25.67■■□□□ 1.7
TDP1-216ENST00000556867 H3BQV1 296 aa25.67■■□□□ 1.7
TDP1-216ENST00000556867 DKC1O60832 514 aaKnown RBP eCLIP25.67■■□□□ 1.7
TDP1-216ENST00000556867 P4HBP07237 508 aaKnown RBP25.67■■□□□ 1.7
TDP1-216ENST00000556867 WDR5P61964 334 aaKnown RBP25.67■■□□□ 1.7
TDP1-216ENST00000556867 KIAA0319LQ8IZA0 1049 aa25.67■■□□□ 1.7
TDP1-216ENST00000556867 PHOSPHO2Q8TCD6 241 aa25.67■■□□□ 1.7
TDP1-216ENST00000556867 PBX4Q9BYU1 374 aa25.67■■□□□ 1.7
TDP1-216ENST00000556867 SEPT9Q9UHD8 586 aaPredicted RBP25.67■■□□□ 1.7
TDP1-216ENST00000556867 KDM3AQ9Y4C1 1321 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 TMEM265A0A087WTH1 108 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 M0QZ92 97 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 TXKP42681 527 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 KCNJ6P48051 423 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 MKRN4PQ13434 485 aaPredicted RBP25.66■■□□□ 1.7
TDP1-216ENST00000556867 LPIN1Q14693 890 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 ZNF174Q15697 407 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 RAB30Q15771 203 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 FBXO47Q5MNV8 452 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 LINC01465Q8N7H1 131 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 APBB2Q92870 758 aa25.66■■□□□ 1.7
TDP1-216ENST00000556867 RBAK-RBAKDNI3L0D1 243 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 K7ELQ4 463 aaPredicted RBP25.65■■□□□ 1.7
TDP1-216ENST00000556867 OR52Z1P0C646 297 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 GHRP10912 638 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 TOB1P50616 345 aaPredicted RBP25.65■■□□□ 1.7
TDP1-216ENST00000556867 ZNF697Q5TEC3 545 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 LARP1BQ659C4 914 aaKnown RBP25.65■■□□□ 1.7
TDP1-216ENST00000556867 MCTP1Q6DN14 999 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 Q7L0L9 218 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 DEFB123Q8N688 67 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 SNX21Q969T3 373 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 LXNQ9BS40 222 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 IFIH1Q9BYX4 1025 aaKnown RBP25.65■■□□□ 1.7
TDP1-216ENST00000556867 CELF4Q9BZC1 486 aaKnown RBP25.65■■□□□ 1.7
TDP1-216ENST00000556867 SQORQ9Y6N5 450 aa25.65■■□□□ 1.7
TDP1-216ENST00000556867 PBX2P40425 430 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 TMEM62Q0P6H9 643 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 TSHZ1Q6ZSZ6 1077 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 ANO5Q75V66 913 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 C4orf19Q8IY42 314 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 METTL13Q8N6R0 699 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 NEK9Q8TD19 979 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 INTS4Q96HW7 963 aaKnown RBP25.64■■□□□ 1.7
TDP1-216ENST00000556867 CEP89Q96ST8 783 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 RGL1Q9NZL6 768 aa25.64■■□□□ 1.7
TDP1-216ENST00000556867 WRAP73Q9P2S5 460 aaPredicted RBP25.64■■□□□ 1.7
TDP1-216ENST00000556867 TMEM150BA6NC51 233 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 DDX11L8A8MPP1 907 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 TBC1D8BQ0IIM8 1120 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 NBR1Q14596 966 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 MTERF2Q49AM1 385 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 EFCAB12Q6NXP0 572 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 HERC6Q8IVU3 1022 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 USP38Q8NB14 1042 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 TIFAQ96CG3 184 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 DYDC2Q96IM9 177 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 EIF2AK1Q9BQI3 630 aaKnown RBP25.63■■□□□ 1.69
TDP1-216ENST00000556867 ZSWIM4Q9H7M6 989 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 MSRAQ9UJ68 235 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 PCDHA11Q9Y5I1 949 aa25.63■■□□□ 1.69
TDP1-216ENST00000556867 TMOD1P28289 359 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 CLCN3P51790 818 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 DEFB103AP81534 67 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 C4orf32Q8N8J7 132 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 HSD17B14Q9BPX1 270 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 PCDHB6Q9Y5E3 794 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 ARID2Q68CP9 1835 aa25.62■■□□□ 1.69
TDP1-216ENST00000556867 POTEMA6NI47 508 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 SLITRK3O94933 977 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 PDCP20941 246 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 RABGGTBP53611 331 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 CYP4A11Q02928 519 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 CTTNQ14247 550 aaKnown RBP25.61■■□□□ 1.69
TDP1-216ENST00000556867 RILPL1Q5EBL4 403 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 PLA2G4FQ68DD2 849 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 LRRC71Q8N4P6 559 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 MAP7D2Q96T17 732 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 TTYH1Q9H313 450 aaPredicted RBP25.61■■□□□ 1.69
TDP1-216ENST00000556867 AGO3Q9H9G7 860 aaKnown RBP25.61■■□□□ 1.69
TDP1-216ENST00000556867 MTMR10Q9NXD2 777 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 YBX2Q9Y2T7 364 aaKnown RBP25.61■■□□□ 1.69
TDP1-216ENST00000556867 PPME1Q9Y570 386 aa25.61■■□□□ 1.69
TDP1-216ENST00000556867 IGKV6-21A0A0C4DH24 114 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 LYPLA2O95372 231 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 VTNP04004 478 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 ZNF710Q8N1W2 664 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 SEMA6BQ9H3T3 888 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 CYP26B1Q9NR63 512 aa25.6■■□□□ 1.69
TDP1-216ENST00000556867 AMHP03971 560 aa25.59■■□□□ 1.69
TDP1-216ENST00000556867 YWHABP31946 246 aaKnown RBP25.59■■□□□ 1.69
TDP1-216ENST00000556867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.59■■□□□ 1.69
TDP1-216ENST00000556867 TPH2Q8IWU9 490 aa25.59■■□□□ 1.69
TDP1-216ENST00000556867 SH2D3AQ9BRG2 576 aa25.59■■□□□ 1.69
TDP1-216ENST00000556867 SUGCTQ9HAC7 445 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms