RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 FAM117BQ6P1L5 589 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 TAF2Q6P1X5 1199 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 BICD2Q8TD16 824 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 LMBR1Q8WVP7 490 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 ARNTL2Q8WYA1 636 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 APBB2Q92870 758 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 PGBD1Q96JS3 809 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 RAD9AQ99638 391 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 KCNH7Q9NS40 1196 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 THEGQ9P2T0 379 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 NFASCO94856 1347 aa8.76□□□□□ -1.01
HNRNPC-226ENST00000556628 MICAL3Q7RTP6 2002 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 ESYT2A0FGR8 921 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 PRPF3O43395 683 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 SREBF1P36956 1147 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 IGBP1P78318 339 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 TAP1Q03518 808 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 GRIK4Q16099 956 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 PLEKHG4Q58EX7 1191 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 CPLX2Q6PUV4 134 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 NIPA1Q7RTP0 329 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 PLA2G4DQ86XP0 818 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 SCUBE3Q8IX30 993 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 MYOCDQ8IZQ8 938 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 FBXL16Q8N461 479 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 USP38Q8NB14 1042 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 ATXN2LQ8WWM7 1075 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 TGS1Q96RS0 853 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 RNF26Q9BY78 433 aaPredicted RBP8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 ZMYND12Q9H0C1 365 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 TMEM260Q9NX78 707 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 TUBE1Q9UJT0 475 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 INSL6Q9Y581 213 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 CYP46A1Q9Y6A2 500 aa8.75□□□□□ -1.01
HNRNPC-226ENST00000556628 NID2Q14112 1375 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 DDX11L8A8MPP1 907 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 M0QZ92 97 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 DDX39AO00148 427 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 RFXAPO00287 272 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 MEIS1O00470 390 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 CPLX1O14810 134 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 BACH1O14867 736 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 ARP10275 920 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 IFNAR1P17181 557 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 SLC26A2P50443 739 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 STAT5BP51692 787 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 ACTR2P61160 394 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 CCT2P78371 535 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 ADAM17P78536 824 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 MRPS5P82675 430 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 MBTPS1Q14703 1052 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 AAK1Q2M2I8 961 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 PLPPR4Q7Z2D5 763 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 TMCO2Q7Z6W1 182 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 RPAINQ86UA6 219 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 PHKBQ93100 1093 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 YME1L1Q96TA2 773 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 SLC26A6Q9BXS9 759 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 AGXT2Q9BYV1 514 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 IFIH1Q9BYX4 1025 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 AGO4Q9HCK5 861 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 TELO2Q9Y4R8 837 aa8.74□□□□□ -1.01
HNRNPC-226ENST00000556628 SIP14410 1827 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 COL4A4P53420 1690 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 LCHNA4D1U4 455 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 LINC01553A4QN01 128 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 UPP2O95045 317 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 CYP3A4P08684 503 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 GHRP10912 638 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 INSRRP14616 1297 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 CD46P15529 392 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 PDIA3P30101 505 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 NLRP5P59047 1200 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 SETQ01105 290 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 SSRP1Q08945 709 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 TCTN1Q2MV58 587 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 IER5Q5VY09 327 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 MIS18BP1Q6P0N0 1132 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.014e-7■■■■□ 21.4
HNRNPC-226ENST00000556628 CKAP2LQ8IYA6 745 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 CYP2W1Q8TAV3 490 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 DNAJB3Q8WWF6 145 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 SAMD11Q96NU1 681 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 SPSB2Q99619 263 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 ZNF577Q9BSK1 485 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 C22orf23Q9BZE7 217 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 TM6SF1Q9BZW5 370 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 TBC1D22BQ9NU19 505 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 MTUS1Q9ULD2 1270 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms