RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 ZNF713Q8N859 430 aaPredicted RBP16.15■□□□□ 0.18
CUX1-215ENST00000556210 TMOD4Q9NZQ9 345 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 TMEM150BA6NC51 233 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 LRRC10BA6NIK2 292 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 GOLGA8KD6RF30 607 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 IPO5O00410 1097 aaKnown RBP16.15■□□□□ 0.18
CUX1-215ENST00000556210 UCHL3P15374 230 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
CUX1-215ENST00000556210 AGBL1Q96MI9 1066 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
CUX1-215ENST00000556210 IFNAR2P48551 515 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 COG2Q14746 738 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 APOBEC3HQ6NTF7 200 aaKnown RBP16.14■□□□□ 0.17
CUX1-215ENST00000556210 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 LRRC15Q8TF66 581 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 SCFD1Q8WVM8 642 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 LXNQ9BS40 222 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 MYH2Q9UKX2 1941 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 HNRNPDLO14979 420 aaKnown RBP16.14■□□□□ 0.17
CUX1-215ENST00000556210 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
CUX1-215ENST00000556210 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
CUX1-215ENST00000556210 ARFGEF2Q9Y6D5 1785 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 FAM86B1E9PN63 330 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
CUX1-215ENST00000556210 FAM86B2P0C5J1 330 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 SEPT7Q16181 437 aaKnown RBP16.14■□□□□ 0.17
CUX1-215ENST00000556210 TRAPPC11Q7Z392 1133 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 HAS1Q92839 578 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 NACC1Q96RE7 527 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 ERGIC2Q96RQ1 377 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 RAB21Q9UL25 225 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
CUX1-215ENST00000556210 PSMD14O00487 310 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 MSH4O15457 936 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 VIMP08670 466 aaKnown RBP16.13■□□□□ 0.17
CUX1-215ENST00000556210 SEL1L2Q5TEA6 688 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 IL1R1P14778 569 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 NF2P35240 595 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 MAP2K2P36507 400 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 MAGOHBQ96A72 148 aaKnown RBP16.13■□□□□ 0.17
CUX1-215ENST00000556210 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 KIFC3Q9BVG8 833 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 MYBL2P10244 700 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 EPHB4P54760 987 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 DHX9Q08211 1270 aaKnown RBP16.13■□□□□ 0.17
CUX1-215ENST00000556210 EPC2Q52LR7 807 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 PADI6Q6TGC4 694 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 PPP1R16BQ96T49 567 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 USP20Q9Y2K6 914 aa16.13■□□□□ 0.17
CUX1-215ENST00000556210 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 FGRP09769 529 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 CCNI2Q6ZMN8 369 aaPredicted RBP16.12■□□□□ 0.17
CUX1-215ENST00000556210 MMS22LQ6ZRQ5 1243 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 CEP170P1Q96L14 293 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 MYCBPQ99417 103 aaPredicted RBP16.12■□□□□ 0.17
CUX1-215ENST00000556210 SYNCQ9H7C4 482 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 SNX24Q9Y343 169 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
CUX1-215ENST00000556210 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
CUX1-215ENST00000556210 AKAP3O75969 853 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 PBX1P40424 430 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 C2CD6Q53TS8 623 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 ARFGAP2Q8N6H7 521 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 CELF4Q9BZC1 486 aaKnown RBP16.12■□□□□ 0.17
CUX1-215ENST00000556210 USP11P51784 963 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 NPEPPSP55786 919 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 SPP2Q13103 211 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 CALCOCO2Q13137 446 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 MIIPQ5JXC2 388 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 KAZNQ674X7 775 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 ZNF507Q8TCN5 953 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 SCN11AQ9UI33 1791 aa16.12■□□□□ 0.17
CUX1-215ENST00000556210 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
CUX1-215ENST00000556210 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 ZNF394Q53GI3 561 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 PROM2Q8N271 834 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 EHD4Q9H223 541 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 ANO9A1A5B4 782 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 CORO7P57737 925 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 OSTNP61366 133 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 SLC20A2Q08357 652 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 CYFIP1Q7L576 1253 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 EML1O00423 815 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 ZBED4O75132 1171 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 IFNB1P01574 187 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 AP3B2Q13367 1082 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 PLA2G4FQ68DD2 849 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 ANKRD42Q8N9B4 389 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms