RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MAGEB2O15479 319 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 STBD1O95210 358 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
ACTN1-217ENST00000556203 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
ACTN1-217ENST00000556203 RABGGTBP53611 331 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
ACTN1-217ENST00000556203 NBR1Q14596 966 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 KIAA0319LQ8IZA0 1049 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 NME8Q8N427 588 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 METTL13Q8N6R0 699 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 TIFAQ96CG3 184 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
ACTN1-217ENST00000556203 NIFKQ9BYG3 293 aaKnown RBP17.06■□□□□ 0.32
ACTN1-217ENST00000556203 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 EFCAB14O75071 495 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 ORC2Q13416 577 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 LPIN1Q14693 890 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 TARBP2Q15633 366 aaKnown RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 RAB30Q15771 203 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 LXNQ9BS40 222 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 IFIH1Q9BYX4 1025 aaKnown RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 CELF4Q9BZC1 486 aaKnown RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-217ENST00000556203 MSRAQ9UJ68 235 aa17.05■□□□□ 0.32
ACTN1-217ENST00000556203 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 CLCN3P51790 818 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 DEFB103AP81534 67 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 CYP4A11Q02928 519 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 TBC1D8BQ0IIM8 1120 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 PLA2G4FQ68DD2 849 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 TSHZ1Q6ZSZ6 1077 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 ANO5Q75V66 913 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 HERC6Q8IVU3 1022 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 LRRC71Q8N4P6 559 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 APBB2Q92870 758 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 PPP1R16BQ96T49 567 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 TTYH1Q9H313 450 aaPredicted RBP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 GINS2Q9Y248 185 aa17.04■□□□□ 0.32
ACTN1-217ENST00000556203 YBX2Q9Y2T7 364 aaKnown RBP17.04■□□□□ 0.32
ACTN1-217ENST00000556203 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 TMEM265A0A087WTH1 108 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-217ENST00000556203 MYOGP15173 224 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 TMOD1P28289 359 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 MKRN4PQ13434 485 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-217ENST00000556203 TMCO2Q7Z6W1 182 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-217ENST00000556203 TPH2Q8IWU9 490 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 C4orf19Q8IY42 314 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 LINC01465Q8N7H1 131 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
ACTN1-217ENST00000556203 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 SEMA6BQ9H3T3 888 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 ZSWIM4Q9H7M6 989 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 AGO3Q9H9G7 860 aaKnown RBP17.03■□□□□ 0.32
ACTN1-217ENST00000556203 MTMR10Q9NXD2 777 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 KAT6AQ92794 2004 aa17.03■□□□□ 0.32
ACTN1-217ENST00000556203 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 POTEMA6NI47 508 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 SLITRK3O94933 977 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 AMHP03971 560 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 VTNP04004 478 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 TECP42680 631 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 SNX21Q969T3 373 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 SQORQ9Y6N5 450 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 SZT2Q5T011 3432 aa17.02■□□□□ 0.32
ACTN1-217ENST00000556203 CD52P31358 61 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
ACTN1-217ENST00000556203 NPEPPSP55786 919 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 KIZQ2M2Z5 673 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 MYOCDQ8IZQ8 938 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 USP38Q8NB14 1042 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 NEK9Q8TD19 979 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
ACTN1-217ENST00000556203 CEP170P1Q96L14 293 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 OSMRQ99650 979 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 HSD17B14Q9BPX1 270 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 ZNF576Q9H609 170 aa17.01■□□□□ 0.31
ACTN1-217ENST00000556203 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms